Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Cxcl13O55038 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cxcl13O55038 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cxcl13O55038 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cxcl13O55038 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cxcl13O55038 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cxcl13O55038 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl13O55038 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl13O55038 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cxcl13O55038 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Cxcl13O55038 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl13O55038 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
Cxcl13O55038 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl13O55038 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl13O55038 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl13O55038 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl13O55038 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.61□□□□□ -0.07
Cxcl13O55038 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.61□□□□□ -0.07
Cxcl13O55038 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.61□□□□□ -0.07
Cxcl13O55038 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.61□□□□□ -0.07
Cxcl13O55038 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cxcl13O55038 Gm18958-201ENSMUST00000174258 762 ntBASIC14.61□□□□□ -0.07
Cxcl13O55038 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.61□□□□□ -0.07
Cxcl13O55038 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.61□□□□□ -0.07
Cxcl13O55038 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl13O55038 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.61□□□□□ -0.07
Cxcl13O55038 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl13O55038 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Cxcl13O55038 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl13O55038 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl13O55038 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Cxcl13O55038 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl13O55038 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cxcl13O55038 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl13O55038 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl13O55038 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl13O55038 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl13O55038 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.6□□□□□ -0.07
Cxcl13O55038 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.6□□□□□ -0.07
Cxcl13O55038 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl13O55038 Gm25016-201ENSMUST00000158399 131 ntBASIC14.6□□□□□ -0.07
Cxcl13O55038 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Cxcl13O55038 Gm7367-201ENSMUST00000057611 492 ntBASIC14.6□□□□□ -0.07
Cxcl13O55038 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Cxcl13O55038 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl13O55038 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.6□□□□□ -0.07
Cxcl13O55038 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Cxcl13O55038 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl13O55038 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl13O55038 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl13O55038 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl13O55038 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl13O55038 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl13O55038 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.59□□□□□ -0.07
Cxcl13O55038 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl13O55038 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl13O55038 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Cxcl13O55038 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl13O55038 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.59□□□□□ -0.07
Cxcl13O55038 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.59□□□□□ -0.07
Cxcl13O55038 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl13O55038 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl13O55038 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cxcl13O55038 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl13O55038 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl13O55038 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl13O55038 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl13O55038 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
Cxcl13O55038 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cxcl13O55038 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cxcl13O55038 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cxcl13O55038 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl13O55038 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl13O55038 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl13O55038 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl13O55038 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.58□□□□□ -0.08
Cxcl13O55038 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cxcl13O55038 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl13O55038 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cxcl13O55038 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.58□□□□□ -0.08
Cxcl13O55038 Gm33142-201ENSMUST00000193913 867 ntBASIC14.58□□□□□ -0.08
Cxcl13O55038 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl13O55038 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl13O55038 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cxcl13O55038 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl13O55038 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl13O55038 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cxcl13O55038 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.58□□□□□ -0.08
Cxcl13O55038 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.58□□□□□ -0.08
Cxcl13O55038 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl13O55038 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cxcl13O55038 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Cxcl13O55038 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl13O55038 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl13O55038 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl13O55038 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl13O55038 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl13O55038 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl13O55038 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl13O55038 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms