Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC22.37■■□□□ 1.17
Cntnap1O54991 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cntnap1O54991 Tgds-204ENSMUST00000228543 1594 ntBASIC22.37■■□□□ 1.17
Cntnap1O54991 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cntnap1O54991 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cntnap1O54991 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cntnap1O54991 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Cntnap1O54991 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cntnap1O54991 Gm14701-201ENSMUST00000117156 348 ntBASIC22.37■■□□□ 1.17
Cntnap1O54991 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Cntnap1O54991 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Cntnap1O54991 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cntnap1O54991 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC22.37■■□□□ 1.17
Cntnap1O54991 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cntnap1O54991 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cntnap1O54991 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cntnap1O54991 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC22.36■■□□□ 1.17
Cntnap1O54991 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cntnap1O54991 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC22.36■■□□□ 1.17
Cntnap1O54991 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC22.36■■□□□ 1.17
Cntnap1O54991 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Cntnap1O54991 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Cntnap1O54991 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Cntnap1O54991 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
Cntnap1O54991 AC084391.1-201ENSMUST00000200651 141 ntBASIC22.35■■□□□ 1.17
Cntnap1O54991 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cntnap1O54991 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC22.35■■□□□ 1.17
Cntnap1O54991 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Cntnap1O54991 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cntnap1O54991 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Cntnap1O54991 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Cntnap1O54991 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cntnap1O54991 Gm4913-201ENSMUST00000117075 1290 ntBASIC22.34■■□□□ 1.17
Cntnap1O54991 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cntnap1O54991 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cntnap1O54991 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cntnap1O54991 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.17
Cntnap1O54991 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cntnap1O54991 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cntnap1O54991 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cntnap1O54991 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cntnap1O54991 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Cntnap1O54991 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC22.33■■□□□ 1.17
Cntnap1O54991 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cntnap1O54991 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Cntnap1O54991 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Cntnap1O54991 Mir3113-201ENSMUST00000175478 76 ntBASIC22.33■■□□□ 1.17
Cntnap1O54991 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC22.33■■□□□ 1.17
Cntnap1O54991 Gm27000-201ENSMUST00000182943 842 ntBASIC22.33■■□□□ 1.17
Cntnap1O54991 Mir6956-201ENSMUST00000183598 62 ntBASIC22.33■■□□□ 1.17
Cntnap1O54991 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cntnap1O54991 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cntnap1O54991 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cntnap1O54991 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cntnap1O54991 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cntnap1O54991 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cntnap1O54991 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC22.32■■□□□ 1.16
Cntnap1O54991 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Cntnap1O54991 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cntnap1O54991 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cntnap1O54991 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cntnap1O54991 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cntnap1O54991 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC22.32■■□□□ 1.16
Cntnap1O54991 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC22.32■■□□□ 1.16
Cntnap1O54991 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC22.32■■□□□ 1.16
Cntnap1O54991 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Cntnap1O54991 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Cntnap1O54991 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cntnap1O54991 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cntnap1O54991 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cntnap1O54991 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cntnap1O54991 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cntnap1O54991 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Cntnap1O54991 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC22.31■■□□□ 1.16
Cntnap1O54991 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cntnap1O54991 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cntnap1O54991 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC22.31■■□□□ 1.16
Cntnap1O54991 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cntnap1O54991 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cntnap1O54991 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Cntnap1O54991 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cntnap1O54991 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Cntnap1O54991 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Cntnap1O54991 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC22.3■■□□□ 1.16
Cntnap1O54991 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC22.3■■□□□ 1.16
Cntnap1O54991 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cntnap1O54991 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cntnap1O54991 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cntnap1O54991 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cntnap1O54991 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cntnap1O54991 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cntnap1O54991 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
Cntnap1O54991 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC22.29■■□□□ 1.16
Cntnap1O54991 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC22.29■■□□□ 1.16
Cntnap1O54991 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cntnap1O54991 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC22.29■■□□□ 1.16
Cntnap1O54991 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC22.29■■□□□ 1.16
Cntnap1O54991 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cntnap1O54991 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cntnap1O54991 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC22.29■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms