Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Per2O54943 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.01■□□□□ 0.47
Per2O54943 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.01■□□□□ 0.47
Per2O54943 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.01■□□□□ 0.47
Per2O54943 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.01■□□□□ 0.47
Per2O54943 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.01■□□□□ 0.47
Per2O54943 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.01■□□□□ 0.47
Per2O54943 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Per2O54943 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Per2O54943 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Per2O54943 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Per2O54943 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.01■□□□□ 0.47
Per2O54943 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Per2O54943 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Per2O54943 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18■□□□□ 0.47
Per2O54943 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18■□□□□ 0.47
Per2O54943 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Per2O54943 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Per2O54943 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18■□□□□ 0.47
Per2O54943 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18■□□□□ 0.47
Per2O54943 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Per2O54943 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Per2O54943 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Per2O54943 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18■□□□□ 0.47
Per2O54943 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Per2O54943 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18■□□□□ 0.47
Per2O54943 Gm4974-201ENSMUST00000209974 875 ntBASIC18■□□□□ 0.47
Per2O54943 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Per2O54943 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Per2O54943 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Per2O54943 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Per2O54943 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Per2O54943 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Per2O54943 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18■□□□□ 0.47
Per2O54943 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Per2O54943 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Per2O54943 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.99■□□□□ 0.47
Per2O54943 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Per2O54943 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Per2O54943 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Per2O54943 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Per2O54943 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Per2O54943 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Per2O54943 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Per2O54943 Gm5643-201ENSMUST00000117081 966 ntBASIC17.99■□□□□ 0.47
Per2O54943 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.99■□□□□ 0.47
Per2O54943 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Per2O54943 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Per2O54943 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Per2O54943 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Per2O54943 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Per2O54943 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Per2O54943 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Per2O54943 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
Per2O54943 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Per2O54943 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Per2O54943 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Per2O54943 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.98■□□□□ 0.47
Per2O54943 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Per2O54943 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.98■□□□□ 0.47
Per2O54943 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Per2O54943 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.98■□□□□ 0.47
Per2O54943 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Per2O54943 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Per2O54943 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Per2O54943 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Per2O54943 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Per2O54943 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Per2O54943 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Per2O54943 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Per2O54943 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Per2O54943 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Per2O54943 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Per2O54943 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Per2O54943 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Per2O54943 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Per2O54943 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Per2O54943 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Per2O54943 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Per2O54943 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Per2O54943 Gm15378-201ENSMUST00000121894 207 ntBASIC17.97■□□□□ 0.47
Per2O54943 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.97■□□□□ 0.47
Per2O54943 Gm43183-201ENSMUST00000200632 547 ntBASIC17.97■□□□□ 0.47
Per2O54943 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Per2O54943 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Per2O54943 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Per2O54943 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Per2O54943 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Per2O54943 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Per2O54943 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Per2O54943 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Per2O54943 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Per2O54943 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Per2O54943 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Per2O54943 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Per2O54943 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.97■□□□□ 0.47
Per2O54943 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Per2O54943 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Per2O54943 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Per2O54943 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms