Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sptlc1O35704 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Sptlc1O35704 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sptlc1O35704 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sptlc1O35704 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sptlc1O35704 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.86■□□□□ 0.61
Sptlc1O35704 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sptlc1O35704 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sptlc1O35704 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sptlc1O35704 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Sptlc1O35704 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sptlc1O35704 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Sptlc1O35704 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Sptlc1O35704 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sptlc1O35704 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.86■□□□□ 0.61
Sptlc1O35704 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sptlc1O35704 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sptlc1O35704 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sptlc1O35704 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sptlc1O35704 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.86■□□□□ 0.61
Sptlc1O35704 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sptlc1O35704 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Sptlc1O35704 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sptlc1O35704 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sptlc1O35704 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.85■□□□□ 0.61
Sptlc1O35704 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sptlc1O35704 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sptlc1O35704 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sptlc1O35704 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sptlc1O35704 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Sptlc1O35704 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sptlc1O35704 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sptlc1O35704 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Sptlc1O35704 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sptlc1O35704 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sptlc1O35704 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sptlc1O35704 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sptlc1O35704 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sptlc1O35704 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.85■□□□□ 0.61
Sptlc1O35704 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.85■□□□□ 0.61
Sptlc1O35704 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sptlc1O35704 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
Sptlc1O35704 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sptlc1O35704 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sptlc1O35704 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Sptlc1O35704 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sptlc1O35704 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.84■□□□□ 0.61
Sptlc1O35704 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sptlc1O35704 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sptlc1O35704 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.84■□□□□ 0.61
Sptlc1O35704 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sptlc1O35704 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.84■□□□□ 0.61
Sptlc1O35704 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sptlc1O35704 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sptlc1O35704 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sptlc1O35704 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sptlc1O35704 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sptlc1O35704 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sptlc1O35704 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sptlc1O35704 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Sptlc1O35704 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sptlc1O35704 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sptlc1O35704 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.83■□□□□ 0.61
Sptlc1O35704 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sptlc1O35704 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Sptlc1O35704 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.83■□□□□ 0.6
Sptlc1O35704 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.83■□□□□ 0.6
Sptlc1O35704 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sptlc1O35704 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sptlc1O35704 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sptlc1O35704 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sptlc1O35704 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sptlc1O35704 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.83■□□□□ 0.6
Sptlc1O35704 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sptlc1O35704 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sptlc1O35704 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sptlc1O35704 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sptlc1O35704 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Sptlc1O35704 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sptlc1O35704 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sptlc1O35704 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.82■□□□□ 0.6
Sptlc1O35704 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sptlc1O35704 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.82■□□□□ 0.6
Sptlc1O35704 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sptlc1O35704 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sptlc1O35704 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sptlc1O35704 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sptlc1O35704 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sptlc1O35704 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Sptlc1O35704 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sptlc1O35704 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sptlc1O35704 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sptlc1O35704 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.81■□□□□ 0.6
Sptlc1O35704 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sptlc1O35704 Gm18958-201ENSMUST00000174258 762 ntBASIC18.81■□□□□ 0.6
Sptlc1O35704 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sptlc1O35704 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sptlc1O35704 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sptlc1O35704 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Sptlc1O35704 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms