Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1i3O35627 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1i3O35627 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1i3O35627 Gm18666-201ENSMUST00000190039 958 ntBASIC18.56■□□□□ 0.56
Nr1i3O35627 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.56■□□□□ 0.56
Nr1i3O35627 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1i3O35627 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1i3O35627 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1i3O35627 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1i3O35627 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1i3O35627 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Nr1i3O35627 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1i3O35627 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1i3O35627 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nr1i3O35627 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nr1i3O35627 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nr1i3O35627 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nr1i3O35627 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nr1i3O35627 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nr1i3O35627 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nr1i3O35627 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.55■□□□□ 0.56
Nr1i3O35627 Gm12441-201ENSMUST00000121806 588 ntBASIC18.55■□□□□ 0.56
Nr1i3O35627 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.55■□□□□ 0.56
Nr1i3O35627 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Nr1i3O35627 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nr1i3O35627 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1i3O35627 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1i3O35627 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1i3O35627 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1i3O35627 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1i3O35627 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1i3O35627 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1i3O35627 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.54■□□□□ 0.56
Nr1i3O35627 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Nr1i3O35627 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1i3O35627 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1i3O35627 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1i3O35627 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1i3O35627 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Nr1i3O35627 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1i3O35627 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1i3O35627 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1i3O35627 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1i3O35627 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1i3O35627 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.53■□□□□ 0.56
Nr1i3O35627 Gm12382-201ENSMUST00000122005 922 ntBASIC18.53■□□□□ 0.56
Nr1i3O35627 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.53■□□□□ 0.56
Nr1i3O35627 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.53■□□□□ 0.56
Nr1i3O35627 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.53■□□□□ 0.56
Nr1i3O35627 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Nr1i3O35627 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.53■□□□□ 0.56
Nr1i3O35627 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1i3O35627 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1i3O35627 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1i3O35627 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.53■□□□□ 0.56
Nr1i3O35627 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1i3O35627 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.53■□□□□ 0.56
Nr1i3O35627 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1i3O35627 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Nr1i3O35627 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.52■□□□□ 0.56
Nr1i3O35627 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nr1i3O35627 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nr1i3O35627 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nr1i3O35627 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Nr1i3O35627 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nr1i3O35627 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nr1i3O35627 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Nr1i3O35627 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.52■□□□□ 0.56
Nr1i3O35627 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.52■□□□□ 0.56
Nr1i3O35627 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.52■□□□□ 0.56
Nr1i3O35627 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Nr1i3O35627 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nr1i3O35627 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nr1i3O35627 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.52■□□□□ 0.55
Nr1i3O35627 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Nr1i3O35627 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1i3O35627 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1i3O35627 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1i3O35627 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1i3O35627 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1i3O35627 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1i3O35627 Gm24841-201ENSMUST00000158676 357 ntBASIC18.51■□□□□ 0.55
Nr1i3O35627 Gm10517-202ENSMUST00000192970 758 ntBASIC18.51■□□□□ 0.55
Nr1i3O35627 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1i3O35627 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Nr1i3O35627 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1i3O35627 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Nr1i3O35627 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1i3O35627 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1i3O35627 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1i3O35627 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1i3O35627 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1i3O35627 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1i3O35627 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1i3O35627 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1i3O35627 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1i3O35627 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Nr1i3O35627 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1i3O35627 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nr1i3O35627 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms