Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Gm5075-201ENSMUST00000196916 622 ntBASIC17.02■□□□□ 0.32
Slc1a6O35544 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc1a6O35544 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Slc1a6O35544 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Slc1a6O35544 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.02■□□□□ 0.32
Slc1a6O35544 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.02■□□□□ 0.32
Slc1a6O35544 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc1a6O35544 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Slc1a6O35544 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Slc1a6O35544 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Slc1a6O35544 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slc1a6O35544 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Slc1a6O35544 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Slc1a6O35544 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc1a6O35544 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Slc1a6O35544 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc1a6O35544 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc1a6O35544 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc1a6O35544 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Slc1a6O35544 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Slc1a6O35544 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Slc1a6O35544 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc1a6O35544 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.01■□□□□ 0.31
Slc1a6O35544 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc1a6O35544 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc1a6O35544 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc1a6O35544 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Slc1a6O35544 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc1a6O35544 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc1a6O35544 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc1a6O35544 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Slc1a6O35544 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17■□□□□ 0.31
Slc1a6O35544 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc1a6O35544 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc1a6O35544 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Slc1a6O35544 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Slc1a6O35544 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc1a6O35544 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc1a6O35544 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Slc1a6O35544 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc1a6O35544 Gm6211-202ENSMUST00000167849 925 ntBASIC17■□□□□ 0.31
Slc1a6O35544 Gm29241-201ENSMUST00000189260 1096 ntBASIC17■□□□□ 0.31
Slc1a6O35544 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17■□□□□ 0.31
Slc1a6O35544 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17■□□□□ 0.31
Slc1a6O35544 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc1a6O35544 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc1a6O35544 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Slc1a6O35544 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc1a6O35544 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Slc1a6O35544 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Slc1a6O35544 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Slc1a6O35544 Gm26596-201ENSMUST00000180464 2655 ntBASIC17■□□□□ 0.31
Slc1a6O35544 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.99■□□□□ 0.31
Slc1a6O35544 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.99■□□□□ 0.31
Slc1a6O35544 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.99■□□□□ 0.31
Slc1a6O35544 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc1a6O35544 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.99■□□□□ 0.31
Slc1a6O35544 Gm42642-201ENSMUST00000200683 355 ntBASIC16.99■□□□□ 0.31
Slc1a6O35544 AV356131-201ENSMUST00000206201 750 ntBASIC16.99■□□□□ 0.31
Slc1a6O35544 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc1a6O35544 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc1a6O35544 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Slc1a6O35544 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Slc1a6O35544 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.99■□□□□ 0.31
Slc1a6O35544 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Slc1a6O35544 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc1a6O35544 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc1a6O35544 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc1a6O35544 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc1a6O35544 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Slc1a6O35544 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc1a6O35544 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Slc1a6O35544 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.99■□□□□ 0.31
Slc1a6O35544 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc1a6O35544 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc1a6O35544 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Slc1a6O35544 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.98■□□□□ 0.31
Slc1a6O35544 Gm11643-201ENSMUST00000119578 864 ntBASIC16.98■□□□□ 0.31
Slc1a6O35544 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Slc1a6O35544 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc1a6O35544 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc1a6O35544 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc1a6O35544 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc1a6O35544 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc1a6O35544 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc1a6O35544 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc1a6O35544 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Slc1a6O35544 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Slc1a6O35544 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc1a6O35544 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Slc1a6O35544 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc1a6O35544 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Slc1a6O35544 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Slc1a6O35544 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Slc1a6O35544 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
Slc1a6O35544 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc1a6O35544 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Slc1a6O35544 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc1a6O35544 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc1a6O35544 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms