Protein–RNA interactions for Protein: O08665

Sema3a, Semaphorin-3A, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3aO08665 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sema3aO08665 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sema3aO08665 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sema3aO08665 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Sema3aO08665 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sema3aO08665 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.44■□□□□ 0.38
Sema3aO08665 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sema3aO08665 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sema3aO08665 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sema3aO08665 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sema3aO08665 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sema3aO08665 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.43■□□□□ 0.38
Sema3aO08665 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.43■□□□□ 0.38
Sema3aO08665 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sema3aO08665 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sema3aO08665 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.43■□□□□ 0.38
Sema3aO08665 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.43■□□□□ 0.38
Sema3aO08665 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.43■□□□□ 0.38
Sema3aO08665 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Sema3aO08665 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sema3aO08665 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sema3aO08665 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.43■□□□□ 0.38
Sema3aO08665 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Sema3aO08665 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sema3aO08665 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.42■□□□□ 0.38
Sema3aO08665 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sema3aO08665 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sema3aO08665 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sema3aO08665 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sema3aO08665 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sema3aO08665 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.42■□□□□ 0.38
Sema3aO08665 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.42■□□□□ 0.38
Sema3aO08665 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sema3aO08665 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sema3aO08665 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.42■□□□□ 0.38
Sema3aO08665 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sema3aO08665 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sema3aO08665 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sema3aO08665 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sema3aO08665 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sema3aO08665 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sema3aO08665 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Sema3aO08665 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sema3aO08665 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sema3aO08665 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sema3aO08665 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sema3aO08665 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sema3aO08665 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sema3aO08665 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sema3aO08665 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sema3aO08665 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sema3aO08665 Gm9731-201ENSMUST00000209480 747 ntBASIC17.41■□□□□ 0.38
Sema3aO08665 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Sema3aO08665 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.41■□□□□ 0.38
Sema3aO08665 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.41■□□□□ 0.38
Sema3aO08665 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sema3aO08665 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sema3aO08665 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sema3aO08665 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sema3aO08665 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.41■□□□□ 0.38
Sema3aO08665 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sema3aO08665 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.4■□□□□ 0.38
Sema3aO08665 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Sema3aO08665 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sema3aO08665 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sema3aO08665 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sema3aO08665 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Sema3aO08665 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.4■□□□□ 0.38
Sema3aO08665 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.4■□□□□ 0.38
Sema3aO08665 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sema3aO08665 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sema3aO08665 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sema3aO08665 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.4■□□□□ 0.38
Sema3aO08665 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sema3aO08665 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sema3aO08665 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sema3aO08665 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sema3aO08665 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sema3aO08665 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sema3aO08665 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sema3aO08665 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sema3aO08665 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Sema3aO08665 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.4■□□□□ 0.38
Sema3aO08665 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sema3aO08665 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sema3aO08665 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sema3aO08665 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Sema3aO08665 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sema3aO08665 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sema3aO08665 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.39■□□□□ 0.37
Sema3aO08665 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Sema3aO08665 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.39■□□□□ 0.37
Sema3aO08665 Gm7638-201ENSMUST00000121348 967 ntBASIC17.39■□□□□ 0.37
Sema3aO08665 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sema3aO08665 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.39■□□□□ 0.37
Sema3aO08665 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sema3aO08665 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.39■□□□□ 0.37
Sema3aO08665 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sema3aO08665 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sema3aO08665 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms