Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raet1aO08602 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raet1aO08602 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Raet1aO08602 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raet1aO08602 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Raet1aO08602 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raet1aO08602 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Raet1aO08602 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Raet1aO08602 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raet1aO08602 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Raet1aO08602 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.3■□□□□ 0.04
Raet1aO08602 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Raet1aO08602 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raet1aO08602 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.3■□□□□ 0.04
Raet1aO08602 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1aO08602 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Raet1aO08602 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1aO08602 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1aO08602 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1aO08602 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Raet1aO08602 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Raet1aO08602 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.29■□□□□ 0.04
Raet1aO08602 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1aO08602 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1aO08602 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1aO08602 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1aO08602 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Raet1aO08602 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1aO08602 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1aO08602 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1aO08602 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1aO08602 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1aO08602 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1aO08602 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1aO08602 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1aO08602 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1aO08602 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1aO08602 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1aO08602 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1aO08602 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1aO08602 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Raet1aO08602 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1aO08602 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.28■□□□□ 0.04
Raet1aO08602 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1aO08602 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1aO08602 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1aO08602 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1aO08602 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1aO08602 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.28■□□□□ 0.04
Raet1aO08602 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.28■□□□□ 0.04
Raet1aO08602 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Raet1aO08602 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.28■□□□□ 0.04
Raet1aO08602 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.28■□□□□ 0.04
Raet1aO08602 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1aO08602 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1aO08602 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Raet1aO08602 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Raet1aO08602 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1aO08602 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1aO08602 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1aO08602 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Raet1aO08602 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.27■□□□□ 0.04
Raet1aO08602 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Raet1aO08602 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Raet1aO08602 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Raet1aO08602 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.27■□□□□ 0.04
Raet1aO08602 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Raet1aO08602 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Raet1aO08602 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Raet1aO08602 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Raet1aO08602 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Raet1aO08602 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Raet1aO08602 Gm8520-201ENSMUST00000186517 868 ntBASIC15.27■□□□□ 0.04
Raet1aO08602 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Raet1aO08602 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Raet1aO08602 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Raet1aO08602 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Raet1aO08602 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Raet1aO08602 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Raet1aO08602 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Raet1aO08602 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.26■□□□□ 0.03
Raet1aO08602 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Raet1aO08602 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Raet1aO08602 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Raet1aO08602 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.26■□□□□ 0.03
Raet1aO08602 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Raet1aO08602 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Raet1aO08602 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Raet1aO08602 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.26■□□□□ 0.03
Raet1aO08602 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Raet1aO08602 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Raet1aO08602 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Raet1aO08602 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Raet1aO08602 Gm24841-201ENSMUST00000158676 357 ntBASIC15.26■□□□□ 0.03
Raet1aO08602 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Raet1aO08602 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.26■□□□□ 0.03
Raet1aO08602 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Raet1aO08602 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Raet1aO08602 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Raet1aO08602 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms