Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
Ccdc180J3QNE4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ccdc180J3QNE4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Ccdc180J3QNE4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ccdc180J3QNE4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Ccdc180J3QNE4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ccdc180J3QNE4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ccdc180J3QNE4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC31.43■■■□□ 2.62
Ccdc180J3QNE4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ccdc180J3QNE4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ccdc180J3QNE4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ccdc180J3QNE4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
Ccdc180J3QNE4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ccdc180J3QNE4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ccdc180J3QNE4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ccdc180J3QNE4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Ccdc180J3QNE4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ccdc180J3QNE4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ccdc180J3QNE4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Ccdc180J3QNE4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Ccdc180J3QNE4 Gm11336-201ENSMUST00000118168 334 ntBASIC31.41■■■□□ 2.62
Ccdc180J3QNE4 Mir8098-201ENSMUST00000184011 137 ntBASIC31.41■■■□□ 2.62
Ccdc180J3QNE4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
Ccdc180J3QNE4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Ccdc180J3QNE4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Ccdc180J3QNE4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
Ccdc180J3QNE4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Ccdc180J3QNE4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
Ccdc180J3QNE4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC31.41■■■□□ 2.62
Ccdc180J3QNE4 Gm18421-201ENSMUST00000204122 625 ntBASIC31.41■■■□□ 2.62
Ccdc180J3QNE4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Ccdc180J3QNE4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC31.4■■■□□ 2.62
Ccdc180J3QNE4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
Ccdc180J3QNE4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Ccdc180J3QNE4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Ccdc180J3QNE4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Ccdc180J3QNE4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC31.39■■■□□ 2.62
Ccdc180J3QNE4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC31.39■■■□□ 2.62
Ccdc180J3QNE4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Ccdc180J3QNE4 Gm13884-201ENSMUST00000118103 829 ntBASIC31.39■■■□□ 2.62
Ccdc180J3QNE4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC31.39■■■□□ 2.62
Ccdc180J3QNE4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC31.39■■■□□ 2.62
Ccdc180J3QNE4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Ccdc180J3QNE4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
Ccdc180J3QNE4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC31.39■■■□□ 2.61
Ccdc180J3QNE4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.61
Ccdc180J3QNE4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ccdc180J3QNE4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Ccdc180J3QNE4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Ccdc180J3QNE4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ccdc180J3QNE4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
Ccdc180J3QNE4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ccdc180J3QNE4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ccdc180J3QNE4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
Ccdc180J3QNE4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC31.37■■■□□ 2.61
Ccdc180J3QNE4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Ccdc180J3QNE4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Ccdc180J3QNE4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC31.37■■■□□ 2.61
Ccdc180J3QNE4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Ccdc180J3QNE4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Ccdc180J3QNE4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Ccdc180J3QNE4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Ccdc180J3QNE4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Ccdc180J3QNE4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Ccdc180J3QNE4 AW822252-206ENSMUST00000208904 237 ntBASIC31.36■■■□□ 2.61
Ccdc180J3QNE4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Ccdc180J3QNE4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Ccdc180J3QNE4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Ccdc180J3QNE4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Ccdc180J3QNE4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ccdc180J3QNE4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ccdc180J3QNE4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC31.35■■■□□ 2.61
Ccdc180J3QNE4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Ccdc180J3QNE4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ccdc180J3QNE4 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
Ccdc180J3QNE4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ccdc180J3QNE4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC31.35■■■□□ 2.61
Ccdc180J3QNE4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ccdc180J3QNE4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ccdc180J3QNE4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ccdc180J3QNE4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ccdc180J3QNE4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Ccdc180J3QNE4 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ccdc180J3QNE4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Ccdc180J3QNE4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC31.34■■■□□ 2.61
Ccdc180J3QNE4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Ccdc180J3QNE4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Ccdc180J3QNE4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ccdc180J3QNE4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Ccdc180J3QNE4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Ccdc180J3QNE4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ccdc180J3QNE4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ccdc180J3QNE4 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ccdc180J3QNE4 Gm28659-201ENSMUST00000188013 759 ntBASIC31.33■■■□□ 2.61
Ccdc180J3QNE4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC31.33■■■□□ 2.61
Ccdc180J3QNE4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ccdc180J3QNE4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ccdc180J3QNE4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Ccdc180J3QNE4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ccdc180J3QNE4 Gm12895-201ENSMUST00000122214 226 ntBASIC31.32■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms