Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sgo2bJ3QMK1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sgo2bJ3QMK1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.23■□□□□ 0.35
Sgo2bJ3QMK1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.23■□□□□ 0.35
Sgo2bJ3QMK1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Sgo2bJ3QMK1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sgo2bJ3QMK1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.23■□□□□ 0.35
Sgo2bJ3QMK1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Sgo2bJ3QMK1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sgo2bJ3QMK1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.23■□□□□ 0.35
Sgo2bJ3QMK1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sgo2bJ3QMK1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sgo2bJ3QMK1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sgo2bJ3QMK1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sgo2bJ3QMK1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sgo2bJ3QMK1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Sgo2bJ3QMK1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sgo2bJ3QMK1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sgo2bJ3QMK1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.22■□□□□ 0.35
Sgo2bJ3QMK1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sgo2bJ3QMK1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sgo2bJ3QMK1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sgo2bJ3QMK1 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.22■□□□□ 0.35
Sgo2bJ3QMK1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Sgo2bJ3QMK1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sgo2bJ3QMK1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sgo2bJ3QMK1 Gm12382-201ENSMUST00000122005 922 ntBASIC17.22■□□□□ 0.35
Sgo2bJ3QMK1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sgo2bJ3QMK1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Sgo2bJ3QMK1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.22■□□□□ 0.35
Sgo2bJ3QMK1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sgo2bJ3QMK1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Sgo2bJ3QMK1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Sgo2bJ3QMK1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sgo2bJ3QMK1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sgo2bJ3QMK1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Sgo2bJ3QMK1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sgo2bJ3QMK1 Gm10653-202ENSMUST00000139570 835 ntBASIC17.21■□□□□ 0.35
Sgo2bJ3QMK1 Gm43183-201ENSMUST00000200632 547 ntBASIC17.21■□□□□ 0.35
Sgo2bJ3QMK1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sgo2bJ3QMK1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sgo2bJ3QMK1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Sgo2bJ3QMK1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sgo2bJ3QMK1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sgo2bJ3QMK1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sgo2bJ3QMK1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sgo2bJ3QMK1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Gm4974-201ENSMUST00000209974 875 ntBASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sgo2bJ3QMK1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sgo2bJ3QMK1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sgo2bJ3QMK1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sgo2bJ3QMK1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Sgo2bJ3QMK1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sgo2bJ3QMK1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.19■□□□□ 0.34
Sgo2bJ3QMK1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sgo2bJ3QMK1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sgo2bJ3QMK1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sgo2bJ3QMK1 Gm10698-201ENSMUST00000182663 604 ntBASIC17.19■□□□□ 0.34
Sgo2bJ3QMK1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.19■□□□□ 0.34
Sgo2bJ3QMK1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.19■□□□□ 0.34
Sgo2bJ3QMK1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sgo2bJ3QMK1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.19■□□□□ 0.34
Sgo2bJ3QMK1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sgo2bJ3QMK1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sgo2bJ3QMK1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sgo2bJ3QMK1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sgo2bJ3QMK1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sgo2bJ3QMK1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sgo2bJ3QMK1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sgo2bJ3QMK1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sgo2bJ3QMK1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Sgo2bJ3QMK1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms