Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.89■□□□□ 0.93
Sh3tc1G3X9F6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Sh3tc1G3X9F6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3tc1G3X9F6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.89■□□□□ 0.93
Sh3tc1G3X9F6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3tc1G3X9F6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3tc1G3X9F6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3tc1G3X9F6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3tc1G3X9F6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3tc1G3X9F6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3tc1G3X9F6 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.88■□□□□ 0.93
Sh3tc1G3X9F6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3tc1G3X9F6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3tc1G3X9F6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3tc1G3X9F6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Sh3tc1G3X9F6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC20.88■□□□□ 0.93
Sh3tc1G3X9F6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3tc1G3X9F6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Sh3tc1G3X9F6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Sh3tc1G3X9F6 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.88■□□□□ 0.93
Sh3tc1G3X9F6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.88■□□□□ 0.93
Sh3tc1G3X9F6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
Sh3tc1G3X9F6 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3tc1G3X9F6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3tc1G3X9F6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Sh3tc1G3X9F6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3tc1G3X9F6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3tc1G3X9F6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Sh3tc1G3X9F6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3tc1G3X9F6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3tc1G3X9F6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Sh3tc1G3X9F6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Sh3tc1G3X9F6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.87■□□□□ 0.93
Sh3tc1G3X9F6 Gm15794-201ENSMUST00000120182 631 ntBASIC20.87■□□□□ 0.93
Sh3tc1G3X9F6 Gm34391-201ENSMUST00000203706 907 ntBASIC20.87■□□□□ 0.93
Sh3tc1G3X9F6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.87■□□□□ 0.93
Sh3tc1G3X9F6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3tc1G3X9F6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.87■□□□□ 0.93
Sh3tc1G3X9F6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3tc1G3X9F6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3tc1G3X9F6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3tc1G3X9F6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3tc1G3X9F6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Sh3tc1G3X9F6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3tc1G3X9F6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3tc1G3X9F6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Sh3tc1G3X9F6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Sh3tc1G3X9F6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Sh3tc1G3X9F6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3tc1G3X9F6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3tc1G3X9F6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3tc1G3X9F6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3tc1G3X9F6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3tc1G3X9F6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 Gm27000-201ENSMUST00000182943 842 ntBASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Sh3tc1G3X9F6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3tc1G3X9F6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3tc1G3X9F6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3tc1G3X9F6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Sh3tc1G3X9F6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.84■□□□□ 0.93
Sh3tc1G3X9F6 Mzt1-203ENSMUST00000227948 952 ntBASIC20.84■□□□□ 0.93
Sh3tc1G3X9F6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3tc1G3X9F6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
Sh3tc1G3X9F6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3tc1G3X9F6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3tc1G3X9F6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3tc1G3X9F6 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3tc1G3X9F6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.84■□□□□ 0.93
Sh3tc1G3X9F6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3tc1G3X9F6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Sh3tc1G3X9F6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3tc1G3X9F6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3tc1G3X9F6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sh3tc1G3X9F6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sh3tc1G3X9F6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.83■□□□□ 0.93
Sh3tc1G3X9F6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sh3tc1G3X9F6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sh3tc1G3X9F6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sh3tc1G3X9F6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms