Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Herc1E9PZP8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Herc1E9PZP8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Gm44719-201ENSMUST00000206404 149 ntBASIC9.72□□□□□ -0.85
Herc1E9PZP8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC9.72□□□□□ -0.85
Herc1E9PZP8 AC122351.1-201ENSMUST00000220467 126 ntBASIC9.72□□□□□ -0.85
Herc1E9PZP8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC9.72□□□□□ -0.85
Herc1E9PZP8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Gm5312-201ENSMUST00000203728 547 ntBASIC9.72□□□□□ -0.85
Herc1E9PZP8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Mir1938-201ENSMUST00000158746 100 ntBASIC9.72□□□□□ -0.85
Herc1E9PZP8 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC9.72□□□□□ -0.85
Herc1E9PZP8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Herc1E9PZP8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Herc1E9PZP8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Herc1E9PZP8 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Herc1E9PZP8 Gm13829-201ENSMUST00000119600 138 ntBASIC9.71□□□□□ -0.85
Herc1E9PZP8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC9.71□□□□□ -0.85
Herc1E9PZP8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Herc1E9PZP8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Herc1E9PZP8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Herc1E9PZP8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Herc1E9PZP8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Herc1E9PZP8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Herc1E9PZP8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Herc1E9PZP8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Herc1E9PZP8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC9.71□□□□□ -0.86
Herc1E9PZP8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
Herc1E9PZP8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Herc1E9PZP8 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC9.71□□□□□ -0.86
Herc1E9PZP8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Herc1E9PZP8 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Herc1E9PZP8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Herc1E9PZP8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Herc1E9PZP8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Herc1E9PZP8 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Herc1E9PZP8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC9.71□□□□□ -0.86
Herc1E9PZP8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Herc1E9PZP8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc1E9PZP8 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Herc1E9PZP8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc1E9PZP8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Herc1E9PZP8 Gm18827-201ENSMUST00000188341 790 ntBASIC9.7□□□□□ -0.86
Herc1E9PZP8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC9.7□□□□□ -0.86
Herc1E9PZP8 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC9.7□□□□□ -0.86
Herc1E9PZP8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Herc1E9PZP8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc1E9PZP8 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc1E9PZP8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc1E9PZP8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc1E9PZP8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc1E9PZP8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc1E9PZP8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC9.7□□□□□ -0.86
Herc1E9PZP8 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc1E9PZP8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Herc1E9PZP8 Fgf17-202ENSMUST00000227123 1336 ntBASIC9.7□□□□□ -0.86
Herc1E9PZP8 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.7□□□□□ -0.86
Herc1E9PZP8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC9.7□□□□□ -0.86
Herc1E9PZP8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Herc1E9PZP8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC9.7□□□□□ -0.86
Herc1E9PZP8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC9.7□□□□□ -0.86
Herc1E9PZP8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc1E9PZP8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc1E9PZP8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc1E9PZP8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc1E9PZP8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc1E9PZP8 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Herc1E9PZP8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Herc1E9PZP8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc1E9PZP8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc1E9PZP8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc1E9PZP8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Herc1E9PZP8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc1E9PZP8 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Herc1E9PZP8 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC9.69□□□□□ -0.86
Herc1E9PZP8 Gm22175-201ENSMUST00000175007 78 ntBASIC9.69□□□□□ -0.86
Herc1E9PZP8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
Herc1E9PZP8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Herc1E9PZP8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Herc1E9PZP8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Herc1E9PZP8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC9.69□□□□□ -0.86
Herc1E9PZP8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms