Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Gm7638-201ENSMUST00000121348 967 ntBASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh17E9PXF0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 Gm23634-201ENSMUST00000175071 91 ntBASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh17E9PXF0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh17E9PXF0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh17E9PXF0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh17E9PXF0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh17E9PXF0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh17E9PXF0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh17E9PXF0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh17E9PXF0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh17E9PXF0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh17E9PXF0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh17E9PXF0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.02■□□□□ 0.16
Pcdh17E9PXF0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Pcdh17E9PXF0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh17E9PXF0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh17E9PXF0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.02■□□□□ 0.16
Pcdh17E9PXF0 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.02■□□□□ 0.16
Pcdh17E9PXF0 Gm7791-201ENSMUST00000219066 539 ntBASIC16.02■□□□□ 0.16
Pcdh17E9PXF0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh17E9PXF0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh17E9PXF0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh17E9PXF0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.02■□□□□ 0.15
Pcdh17E9PXF0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh17E9PXF0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh17E9PXF0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh17E9PXF0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh17E9PXF0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh17E9PXF0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh17E9PXF0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
Pcdh17E9PXF0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms