Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Col6a3E9PWQ3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.33■□□□□ 0.37
Col6a3E9PWQ3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
Col6a3E9PWQ3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.33■□□□□ 0.37
Col6a3E9PWQ3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col6a3E9PWQ3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col6a3E9PWQ3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Col6a3E9PWQ3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col6a3E9PWQ3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col6a3E9PWQ3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col6a3E9PWQ3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col6a3E9PWQ3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col6a3E9PWQ3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col6a3E9PWQ3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.32■□□□□ 0.36
Col6a3E9PWQ3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Col6a3E9PWQ3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Col6a3E9PWQ3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Col6a3E9PWQ3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col6a3E9PWQ3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Col6a3E9PWQ3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col6a3E9PWQ3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col6a3E9PWQ3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col6a3E9PWQ3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.32■□□□□ 0.36
Col6a3E9PWQ3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.32■□□□□ 0.36
Col6a3E9PWQ3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC17.32■□□□□ 0.36
Col6a3E9PWQ3 Gm13036-201ENSMUST00000117799 748 ntBASIC17.32■□□□□ 0.36
Col6a3E9PWQ3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Col6a3E9PWQ3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a3E9PWQ3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a3E9PWQ3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.31■□□□□ 0.36
Col6a3E9PWQ3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a3E9PWQ3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a3E9PWQ3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a3E9PWQ3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a3E9PWQ3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Col6a3E9PWQ3 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.31■□□□□ 0.36
Col6a3E9PWQ3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a3E9PWQ3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a3E9PWQ3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a3E9PWQ3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a3E9PWQ3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.31■□□□□ 0.36
Col6a3E9PWQ3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a3E9PWQ3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a3E9PWQ3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a3E9PWQ3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a3E9PWQ3 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC17.31■□□□□ 0.36
Col6a3E9PWQ3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.31■□□□□ 0.36
Col6a3E9PWQ3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.31■□□□□ 0.36
Col6a3E9PWQ3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col6a3E9PWQ3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col6a3E9PWQ3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Col6a3E9PWQ3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col6a3E9PWQ3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col6a3E9PWQ3 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.3■□□□□ 0.36
Col6a3E9PWQ3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col6a3E9PWQ3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col6a3E9PWQ3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Col6a3E9PWQ3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col6a3E9PWQ3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.29■□□□□ 0.36
Col6a3E9PWQ3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Col6a3E9PWQ3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col6a3E9PWQ3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col6a3E9PWQ3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.29■□□□□ 0.36
Col6a3E9PWQ3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col6a3E9PWQ3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col6a3E9PWQ3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.29■□□□□ 0.36
Col6a3E9PWQ3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col6a3E9PWQ3 Mir8117-201ENSMUST00000184773 107 ntBASIC17.29■□□□□ 0.36
Col6a3E9PWQ3 Mir7023-201ENSMUST00000185093 64 ntBASIC17.29■□□□□ 0.36
Col6a3E9PWQ3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col6a3E9PWQ3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Col6a3E9PWQ3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Col6a3E9PWQ3 Gm13418-201ENSMUST00000119097 944 ntBASIC17.29■□□□□ 0.36
Col6a3E9PWQ3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col6a3E9PWQ3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col6a3E9PWQ3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 AC130829.1-201ENSMUST00000221548 494 ntBASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.28■□□□□ 0.36
Col6a3E9PWQ3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col6a3E9PWQ3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.27■□□□□ 0.36
Col6a3E9PWQ3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms