Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a4A2AX52 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Col6a4A2AX52 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a4A2AX52 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.51□□□□□ -0.09
Col6a4A2AX52 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Col6a4A2AX52 Mir770-201ENSMUST00000103252 94 ntBASIC14.51□□□□□ -0.09
Col6a4A2AX52 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a4A2AX52 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.51□□□□□ -0.09
Col6a4A2AX52 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.51□□□□□ -0.09
Col6a4A2AX52 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a4A2AX52 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Col6a4A2AX52 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a4A2AX52 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a4A2AX52 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a4A2AX52 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.51□□□□□ -0.09
Col6a4A2AX52 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a4A2AX52 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a4A2AX52 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a4A2AX52 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a4A2AX52 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.5□□□□□ -0.09
Col6a4A2AX52 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a4A2AX52 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a4A2AX52 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a4A2AX52 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a4A2AX52 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.5□□□□□ -0.09
Col6a4A2AX52 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a4A2AX52 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.5□□□□□ -0.09
Col6a4A2AX52 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a4A2AX52 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Col6a4A2AX52 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a4A2AX52 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a4A2AX52 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Col6a4A2AX52 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a4A2AX52 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.5□□□□□ -0.09
Col6a4A2AX52 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a4A2AX52 Gm2651-201ENSMUST00000203560 838 ntBASIC14.5□□□□□ -0.09
Col6a4A2AX52 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a4A2AX52 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a4A2AX52 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a4A2AX52 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a4A2AX52 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col6a4A2AX52 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a4A2AX52 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a4A2AX52 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a4A2AX52 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.49□□□□□ -0.09
Col6a4A2AX52 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a4A2AX52 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a4A2AX52 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a4A2AX52 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a4A2AX52 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a4A2AX52 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a4A2AX52 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.49□□□□□ -0.09
Col6a4A2AX52 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a4A2AX52 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a4A2AX52 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a4A2AX52 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a4A2AX52 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a4A2AX52 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a4A2AX52 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col6a4A2AX52 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Col6a4A2AX52 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a4A2AX52 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a4A2AX52 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a4A2AX52 Gm11452-201ENSMUST00000122376 690 ntBASIC14.48□□□□□ -0.09
Col6a4A2AX52 Gm37935-201ENSMUST00000192012 982 ntBASIC14.48□□□□□ -0.09
Col6a4A2AX52 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Col6a4A2AX52 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a4A2AX52 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a4A2AX52 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a4A2AX52 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
Col6a4A2AX52 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Col6a4A2AX52 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a4A2AX52 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Col6a4A2AX52 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a4A2AX52 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a4A2AX52 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a4A2AX52 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a4A2AX52 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.48□□□□□ -0.09
Col6a4A2AX52 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a4A2AX52 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a4A2AX52 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a4A2AX52 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.48□□□□□ -0.09
Col6a4A2AX52 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a4A2AX52 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Gm9731-201ENSMUST00000209480 747 ntBASIC14.47□□□□□ -0.09
Col6a4A2AX52 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a4A2AX52 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms