Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.12■□□□□ 0.49
Scn1aA2APX8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn1aA2APX8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scn1aA2APX8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn1aA2APX8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn1aA2APX8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn1aA2APX8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Mir5130-201ENSMUST00000175160 84 ntBASIC18.11■□□□□ 0.49
Scn1aA2APX8 Gm27000-201ENSMUST00000182943 842 ntBASIC18.11■□□□□ 0.49
Scn1aA2APX8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.11■□□□□ 0.49
Scn1aA2APX8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn1aA2APX8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn1aA2APX8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn1aA2APX8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn1aA2APX8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Scn1aA2APX8 Gm6345-202ENSMUST00000180900 204 ntBASIC18.1■□□□□ 0.49
Scn1aA2APX8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.1■□□□□ 0.49
Scn1aA2APX8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.1■□□□□ 0.49
Scn1aA2APX8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Scn1aA2APX8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn1aA2APX8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.1■□□□□ 0.49
Scn1aA2APX8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.1■□□□□ 0.49
Scn1aA2APX8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn1aA2APX8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Scn1aA2APX8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn1aA2APX8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn1aA2APX8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn1aA2APX8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn1aA2APX8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn1aA2APX8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn1aA2APX8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn1aA2APX8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn1aA2APX8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn1aA2APX8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn1aA2APX8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Scn1aA2APX8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn1aA2APX8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.09■□□□□ 0.49
Scn1aA2APX8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.09■□□□□ 0.49
Scn1aA2APX8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Scn1aA2APX8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn1aA2APX8 Gm22697-201ENSMUST00000175194 63 ntBASIC18.09■□□□□ 0.49
Scn1aA2APX8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn1aA2APX8 Gm7213-201ENSMUST00000215977 950 ntBASIC18.09■□□□□ 0.49
Scn1aA2APX8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn1aA2APX8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.09■□□□□ 0.49
Scn1aA2APX8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn1aA2APX8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn1aA2APX8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Scn1aA2APX8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Scn1aA2APX8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn1aA2APX8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn1aA2APX8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn1aA2APX8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn1aA2APX8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Scn1aA2APX8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn1aA2APX8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scn1aA2APX8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn1aA2APX8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn1aA2APX8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scn1aA2APX8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Scn1aA2APX8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn1aA2APX8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn1aA2APX8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Scn1aA2APX8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn1aA2APX8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scn1aA2APX8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scn1aA2APX8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scn1aA2APX8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn1aA2APX8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scn1aA2APX8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn1aA2APX8 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.07■□□□□ 0.48
Scn1aA2APX8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.07■□□□□ 0.48
Scn1aA2APX8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Scn1aA2APX8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms