Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC9.13□□□□□ -0.95
Ubr4A2AN08 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Gm10355-201ENSMUST00000097146 517 ntBASIC9.13□□□□□ -0.95
Ubr4A2AN08 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Gm5866-201ENSMUST00000177881 973 ntBASIC9.13□□□□□ -0.95
Ubr4A2AN08 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Rprl3-201ENSMUST00000157400 290 ntBASIC9.13□□□□□ -0.95
Ubr4A2AN08 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Gm7229-201ENSMUST00000214719 1007 ntBASIC9.13□□□□□ -0.95
Ubr4A2AN08 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Gm44719-201ENSMUST00000206404 149 ntBASIC9.12□□□□□ -0.95
Ubr4A2AN08 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ubr4A2AN08 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Ubr4A2AN08 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ubr4A2AN08 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ubr4A2AN08 Gm6277-202ENSMUST00000224036 2779 ntBASIC9.12□□□□□ -0.95
Ubr4A2AN08 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Ubr4A2AN08 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ubr4A2AN08 Gm6184-201ENSMUST00000120403 1261 ntBASIC9.12□□□□□ -0.95
Ubr4A2AN08 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ubr4A2AN08 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
Ubr4A2AN08 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ubr4A2AN08 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC9.12□□□□□ -0.95
Ubr4A2AN08 AC122351.1-201ENSMUST00000220467 126 ntBASIC9.12□□□□□ -0.95
Ubr4A2AN08 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ubr4A2AN08 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ubr4A2AN08 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ubr4A2AN08 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.12□□□□□ -0.95
Ubr4A2AN08 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC9.12□□□□□ -0.95
Ubr4A2AN08 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ubr4A2AN08 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ubr4A2AN08 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ubr4A2AN08 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ubr4A2AN08 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ubr4A2AN08 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC9.11□□□□□ -0.95
Ubr4A2AN08 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Mir8117-201ENSMUST00000184773 107 ntBASIC9.11□□□□□ -0.95
Ubr4A2AN08 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ubr4A2AN08 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC9.11□□□□□ -0.95
Ubr4A2AN08 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ubr4A2AN08 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Ubr4A2AN08 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Gm44945-201ENSMUST00000206764 1187 ntBASIC9.1□□□□□ -0.95
Ubr4A2AN08 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ubr4A2AN08 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms