Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-1A0N8R1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav12-1A0N8R1 Gm10138-203ENSMUST00000206952 366 ntBASIC14.43□□□□□ -0.1
Trav12-1A0N8R1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-1A0N8R1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-1A0N8R1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav12-1A0N8R1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-1A0N8R1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-1A0N8R1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav12-1A0N8R1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-1A0N8R1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-1A0N8R1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-1A0N8R1 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.43□□□□□ -0.1
Trav12-1A0N8R1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12-1A0N8R1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trav12-1A0N8R1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-1A0N8R1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-1A0N8R1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-1A0N8R1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trav12-1A0N8R1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-1A0N8R1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-1A0N8R1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-1A0N8R1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Trav12-1A0N8R1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-1A0N8R1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.42□□□□□ -0.1
Trav12-1A0N8R1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav12-1A0N8R1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.42□□□□□ -0.1
Trav12-1A0N8R1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.42□□□□□ -0.1
Trav12-1A0N8R1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-1A0N8R1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-1A0N8R1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-1A0N8R1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-1A0N8R1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-1A0N8R1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.41□□□□□ -0.1
Trav12-1A0N8R1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-1A0N8R1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-1A0N8R1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-1A0N8R1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-1A0N8R1 Gm13216-201ENSMUST00000117145 591 ntBASIC14.41□□□□□ -0.1
Trav12-1A0N8R1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-1A0N8R1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav12-1A0N8R1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-1A0N8R1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav12-1A0N8R1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav12-1A0N8R1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-1A0N8R1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-1A0N8R1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.41□□□□□ -0.1
Trav12-1A0N8R1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-1A0N8R1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-1A0N8R1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-1A0N8R1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Trav12-1A0N8R1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-1A0N8R1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-1A0N8R1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav12-1A0N8R1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-1A0N8R1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trav12-1A0N8R1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav12-1A0N8R1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav12-1A0N8R1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trav12-1A0N8R1 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.39□□□□□ -0.11
Trav12-1A0N8R1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-1A0N8R1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-1A0N8R1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-1A0N8R1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-1A0N8R1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-1A0N8R1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-1A0N8R1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-1A0N8R1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav12-1A0N8R1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-1A0N8R1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav12-1A0N8R1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-1A0N8R1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-1A0N8R1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms