Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Smim17A0A504 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Smim17A0A504 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Smim17A0A504 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Smim17A0A504 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.7■□□□□ 0.1
Smim17A0A504 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.7■□□□□ 0.1
Smim17A0A504 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.7■□□□□ 0.1
Smim17A0A504 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.7■□□□□ 0.1
Smim17A0A504 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.7■□□□□ 0.1
Smim17A0A504 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.7■□□□□ 0.1
Smim17A0A504 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.7■□□□□ 0.1
Smim17A0A504 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Smim17A0A504 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Smim17A0A504 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smim17A0A504 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smim17A0A504 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smim17A0A504 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smim17A0A504 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smim17A0A504 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smim17A0A504 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Smim17A0A504 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smim17A0A504 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smim17A0A504 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smim17A0A504 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smim17A0A504 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Smim17A0A504 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smim17A0A504 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smim17A0A504 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smim17A0A504 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Smim17A0A504 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smim17A0A504 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.69■□□□□ 0.1
Smim17A0A504 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.69■□□□□ 0.1
Smim17A0A504 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Smim17A0A504 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.69■□□□□ 0.1
Smim17A0A504 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smim17A0A504 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smim17A0A504 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smim17A0A504 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smim17A0A504 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smim17A0A504 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smim17A0A504 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.68■□□□□ 0.1
Smim17A0A504 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smim17A0A504 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Smim17A0A504 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smim17A0A504 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smim17A0A504 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smim17A0A504 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smim17A0A504 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smim17A0A504 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smim17A0A504 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Smim17A0A504 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.68■□□□□ 0.1
Smim17A0A504 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Smim17A0A504 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.68■□□□□ 0.1
Smim17A0A504 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smim17A0A504 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.68■□□□□ 0.1
Smim17A0A504 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smim17A0A504 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smim17A0A504 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smim17A0A504 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smim17A0A504 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smim17A0A504 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smim17A0A504 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.67■□□□□ 0.1
Smim17A0A504 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smim17A0A504 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smim17A0A504 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smim17A0A504 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smim17A0A504 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smim17A0A504 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Smim17A0A504 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smim17A0A504 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smim17A0A504 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smim17A0A504 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smim17A0A504 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.67■□□□□ 0.1
Smim17A0A504 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Smim17A0A504 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smim17A0A504 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smim17A0A504 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smim17A0A504 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smim17A0A504 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms