Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgb8A0A140LI48 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Dio3-201ENSMUST00000097228 1449 ntBASIC15.6■□□□□ 0.09
Pcdhgb8A0A140LI48 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgb8A0A140LI48 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgb8A0A140LI48 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgb8A0A140LI48 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgb8A0A140LI48 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Pcdhgb8A0A140LI48 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgb8A0A140LI48 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgb8A0A140LI48 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgb8A0A140LI48 Gm12896-201ENSMUST00000118430 226 ntBASIC15.59■□□□□ 0.09
Pcdhgb8A0A140LI48 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgb8A0A140LI48 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgb8A0A140LI48 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgb8A0A140LI48 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.59■□□□□ 0.09
Pcdhgb8A0A140LI48 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgb8A0A140LI48 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhgb8A0A140LI48 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhgb8A0A140LI48 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgb8A0A140LI48 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.59■□□□□ 0.09
Pcdhgb8A0A140LI48 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgb8A0A140LI48 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhgb8A0A140LI48 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhgb8A0A140LI48 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhgb8A0A140LI48 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhgb8A0A140LI48 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhgb8A0A140LI48 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgb8A0A140LI48 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgb8A0A140LI48 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgb8A0A140LI48 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhgb8A0A140LI48 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgb8A0A140LI48 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdhgb8A0A140LI48 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgb8A0A140LI48 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgb8A0A140LI48 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdhgb8A0A140LI48 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgb8A0A140LI48 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgb8A0A140LI48 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhgb8A0A140LI48 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgb8A0A140LI48 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgb8A0A140LI48 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgb8A0A140LI48 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms