Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.97■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.97■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Atg4a-psA0A0G2JFS9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Il3ra-202ENSMUST00000223589 738 ntBASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Atg4a-psA0A0G2JFS9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.95■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.95■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.95■□□□□ 0.94
Atg4a-psA0A0G2JFS9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.95■□□□□ 0.94
Atg4a-psA0A0G2JFS9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.95■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.94■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Gm37055-201ENSMUST00000191866 133 ntBASIC20.94■□□□□ 0.94
Atg4a-psA0A0G2JFS9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.94■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Atg4a-psA0A0G2JFS9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.94■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Gm5417-201ENSMUST00000079706 384 ntBASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4a-psA0A0G2JFS9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms