Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm37856-201ENSMUST00000191634 999 ntBASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Gm42545-201ENSMUST00000202755 922 ntBASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Gm11643-201ENSMUST00000119578 864 ntBASIC12.55□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Gm6576-201ENSMUST00000169678 883 ntBASIC12.55□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Gm18666-201ENSMUST00000190039 958 ntBASIC12.55□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9n-2A0A0G2JDP3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms