Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gm5067-201ENSMUST00000170449 1009 ntBASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gm9870-201ENSMUST00000063874 645 ntBASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gm16499-203ENSMUST00000204633 2177 ntBASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gm12366-201ENSMUST00000121722 873 ntBASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tcrg-V4A0A0B4J1J8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms