Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igkv5-43A0A0B4J1J2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.61■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.61■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.61■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Gm27389-201ENSMUST00000183622 195 ntBASIC17.61■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.61■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.6■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.6■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv5-43A0A0B4J1J2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.6■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.59■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.59■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Igkv5-43A0A0B4J1J2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.59■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Gm26039-201ENSMUST00000158152 144 ntBASIC17.59■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.59■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igkv5-43A0A0B4J1J2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Igkv5-43A0A0B4J1J2 AA414768-201ENSMUST00000121924 1257 ntBASIC17.58■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.58■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.58■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.58■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.58■□□□□ 0.4
Igkv5-43A0A0B4J1J2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.58■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Rarb-207ENSMUST00000225921 2756 ntBASIC17.58■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Gm6345-202ENSMUST00000180900 204 ntBASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Igkv5-43A0A0B4J1J2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms