Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv19A0A0B4J1H4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv19A0A0B4J1H4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv19A0A0B4J1H4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv19A0A0B4J1H4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv19A0A0B4J1H4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv19A0A0B4J1H4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.89□□□□□ -0.19
Trbv19A0A0B4J1H4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv19A0A0B4J1H4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.89□□□□□ -0.19
Trbv19A0A0B4J1H4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv19A0A0B4J1H4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv19A0A0B4J1H4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trbv19A0A0B4J1H4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trbv19A0A0B4J1H4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv19A0A0B4J1H4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv19A0A0B4J1H4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv19A0A0B4J1H4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv19A0A0B4J1H4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv19A0A0B4J1H4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv19A0A0B4J1H4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv19A0A0B4J1H4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trbv19A0A0B4J1H4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trbv19A0A0B4J1H4 Gm15039-201ENSMUST00000118914 875 ntBASIC13.88□□□□□ -0.19
Trbv19A0A0B4J1H4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.88□□□□□ -0.19
Trbv19A0A0B4J1H4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.88□□□□□ -0.19
Trbv19A0A0B4J1H4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv19A0A0B4J1H4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv19A0A0B4J1H4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trbv19A0A0B4J1H4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv19A0A0B4J1H4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trbv19A0A0B4J1H4 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trbv19A0A0B4J1H4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv19A0A0B4J1H4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv19A0A0B4J1H4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv19A0A0B4J1H4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv19A0A0B4J1H4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv19A0A0B4J1H4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv19A0A0B4J1H4 Gm6576-201ENSMUST00000169678 883 ntBASIC13.87□□□□□ -0.19
Trbv19A0A0B4J1H4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.87□□□□□ -0.19
Trbv19A0A0B4J1H4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv19A0A0B4J1H4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv19A0A0B4J1H4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv19A0A0B4J1H4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trbv19A0A0B4J1H4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.87□□□□□ -0.19
Trbv19A0A0B4J1H4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trbv19A0A0B4J1H4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv19A0A0B4J1H4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv19A0A0B4J1H4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv19A0A0B4J1H4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Trbv19A0A0B4J1H4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv19A0A0B4J1H4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv19A0A0B4J1H4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv19A0A0B4J1H4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv19A0A0B4J1H4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv19A0A0B4J1H4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv19A0A0B4J1H4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv19A0A0B4J1H4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv19A0A0B4J1H4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trbv19A0A0B4J1H4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv19A0A0B4J1H4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv19A0A0B4J1H4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv19A0A0B4J1H4 Gm13158-201ENSMUST00000122007 736 ntBASIC13.86□□□□□ -0.19
Trbv19A0A0B4J1H4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv19A0A0B4J1H4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv19A0A0B4J1H4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv19A0A0B4J1H4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.86□□□□□ -0.19
Trbv19A0A0B4J1H4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trbv19A0A0B4J1H4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.86□□□□□ -0.19
Trbv19A0A0B4J1H4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv19A0A0B4J1H4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trbv19A0A0B4J1H4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trbv19A0A0B4J1H4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv19A0A0B4J1H4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
Trbv19A0A0B4J1H4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trbv19A0A0B4J1H4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv19A0A0B4J1H4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trbv19A0A0B4J1H4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trbv19A0A0B4J1H4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv19A0A0B4J1H4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.85□□□□□ -0.19
Trbv19A0A0B4J1H4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv19A0A0B4J1H4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv19A0A0B4J1H4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv19A0A0B4J1H4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv19A0A0B4J1H4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv19A0A0B4J1H4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trbv19A0A0B4J1H4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv19A0A0B4J1H4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv19A0A0B4J1H4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv19A0A0B4J1H4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Trbv19A0A0B4J1H4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv19A0A0B4J1H4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv19A0A0B4J1H4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv19A0A0B4J1H4 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.84□□□□□ -0.19
Trbv19A0A0B4J1H4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv19A0A0B4J1H4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv19A0A0B4J1H4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv19A0A0B4J1H4 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.84□□□□□ -0.19
Trbv19A0A0B4J1H4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv19A0A0B4J1H4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Trbv19A0A0B4J1H4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms