Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv15A0A0A6YYE3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.34□□□□□ -0.11
Trbv15A0A0A6YYE3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.33□□□□□ -0.11
Trbv15A0A0A6YYE3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv15A0A0A6YYE3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv15A0A0A6YYE3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv15A0A0A6YYE3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trbv15A0A0A6YYE3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trbv15A0A0A6YYE3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv15A0A0A6YYE3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Trbv15A0A0A6YYE3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv15A0A0A6YYE3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv15A0A0A6YYE3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv15A0A0A6YYE3 Zfp783-201ENSMUST00000095946 670 ntBASIC14.33□□□□□ -0.12
Trbv15A0A0A6YYE3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv15A0A0A6YYE3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv15A0A0A6YYE3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv15A0A0A6YYE3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv15A0A0A6YYE3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.33□□□□□ -0.12
Trbv15A0A0A6YYE3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv15A0A0A6YYE3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv15A0A0A6YYE3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv15A0A0A6YYE3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv15A0A0A6YYE3 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.33□□□□□ -0.12
Trbv15A0A0A6YYE3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv15A0A0A6YYE3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trbv15A0A0A6YYE3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv15A0A0A6YYE3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv15A0A0A6YYE3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv15A0A0A6YYE3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv15A0A0A6YYE3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv15A0A0A6YYE3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv15A0A0A6YYE3 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.31□□□□□ -0.12
Trbv15A0A0A6YYE3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv15A0A0A6YYE3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv15A0A0A6YYE3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv15A0A0A6YYE3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv15A0A0A6YYE3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv15A0A0A6YYE3 Gm2399-201ENSMUST00000104944 225 ntBASIC14.31□□□□□ -0.12
Trbv15A0A0A6YYE3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trbv15A0A0A6YYE3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv15A0A0A6YYE3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.31□□□□□ -0.12
Trbv15A0A0A6YYE3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv15A0A0A6YYE3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv15A0A0A6YYE3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv15A0A0A6YYE3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv15A0A0A6YYE3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv15A0A0A6YYE3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms