Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Trav6d-5A0A075B6B9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trav6d-5A0A075B6B9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6d-5A0A075B6B9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.96□□□□□ -0.17
Trav6d-5A0A075B6B9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trav6d-5A0A075B6B9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trav6d-5A0A075B6B9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6d-5A0A075B6B9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6d-5A0A075B6B9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Trav6d-5A0A075B6B9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Trav6d-5A0A075B6B9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav6d-5A0A075B6B9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-5A0A075B6B9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-5A0A075B6B9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Trav6d-5A0A075B6B9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-5A0A075B6B9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-5A0A075B6B9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.95□□□□□ -0.18
Trav6d-5A0A075B6B9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-5A0A075B6B9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-5A0A075B6B9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trav6d-5A0A075B6B9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-5A0A075B6B9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav6d-5A0A075B6B9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-5A0A075B6B9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-5A0A075B6B9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav6d-5A0A075B6B9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-5A0A075B6B9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-5A0A075B6B9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-5A0A075B6B9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-5A0A075B6B9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-5A0A075B6B9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6d-5A0A075B6B9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6d-5A0A075B6B9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Gm13401-201ENSMUST00000117074 291 ntBASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6d-5A0A075B6B9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Mir2861-201ENSMUST00000175539 82 ntBASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-5A0A075B6B9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms