Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-6A0A075B6B2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trav6n-6A0A075B6B2 Gm37179-201ENSMUST00000194862 823 ntBASIC12.89□□□□□ -0.35
Trav6n-6A0A075B6B2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav6n-6A0A075B6B2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-6A0A075B6B2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-6A0A075B6B2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-6A0A075B6B2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-6A0A075B6B2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-6A0A075B6B2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-6A0A075B6B2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Trav6n-6A0A075B6B2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-6A0A075B6B2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav6n-6A0A075B6B2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Gm6365-201ENSMUST00000054711 744 ntBASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Gm10602-201ENSMUST00000098239 609 ntBASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6n-6A0A075B6B2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Mir5133-201ENSMUST00000174955 77 ntBASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Gm26971-201ENSMUST00000182423 1072 ntBASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6n-6A0A075B6B2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-6A0A075B6B2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms