Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav18A0A075B656 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.16□□□□□ -0.14
Trav18A0A075B656 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav18A0A075B656 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav18A0A075B656 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav18A0A075B656 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav18A0A075B656 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.15□□□□□ -0.14
Trav18A0A075B656 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav18A0A075B656 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav18A0A075B656 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav18A0A075B656 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trav18A0A075B656 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav18A0A075B656 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav18A0A075B656 Gm12933-201ENSMUST00000120203 872 ntBASIC14.15□□□□□ -0.14
Trav18A0A075B656 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav18A0A075B656 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav18A0A075B656 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.15□□□□□ -0.14
Trav18A0A075B656 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav18A0A075B656 Gm2559-201ENSMUST00000201323 363 ntBASIC14.15□□□□□ -0.14
Trav18A0A075B656 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav18A0A075B656 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav18A0A075B656 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav18A0A075B656 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav18A0A075B656 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav18A0A075B656 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav18A0A075B656 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav18A0A075B656 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav18A0A075B656 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav18A0A075B656 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav18A0A075B656 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav18A0A075B656 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav18A0A075B656 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav18A0A075B656 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav18A0A075B656 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.13□□□□□ -0.15
Trav18A0A075B656 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav18A0A075B656 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav18A0A075B656 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav18A0A075B656 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav18A0A075B656 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trav18A0A075B656 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav18A0A075B656 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav18A0A075B656 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav18A0A075B656 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav18A0A075B656 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav18A0A075B656 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trav18A0A075B656 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav18A0A075B656 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav18A0A075B656 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav18A0A075B656 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav18A0A075B656 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav18A0A075B656 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms