Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav16nA0A075B634 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16nA0A075B634 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16nA0A075B634 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16nA0A075B634 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav16nA0A075B634 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav16nA0A075B634 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16nA0A075B634 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16nA0A075B634 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16nA0A075B634 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16nA0A075B634 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16nA0A075B634 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16nA0A075B634 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav16nA0A075B634 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Trav16nA0A075B634 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav16nA0A075B634 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav16nA0A075B634 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav16nA0A075B634 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16nA0A075B634 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms