Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8n-2A0A075B633 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8n-2A0A075B633 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Trav8n-2A0A075B633 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trav8n-2A0A075B633 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trav8n-2A0A075B633 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8n-2A0A075B633 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8n-2A0A075B633 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav8n-2A0A075B633 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav8n-2A0A075B633 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav8n-2A0A075B633 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8n-2A0A075B633 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8n-2A0A075B633 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8n-2A0A075B633 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8n-2A0A075B633 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8n-2A0A075B633 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8n-2A0A075B633 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav8n-2A0A075B633 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
Trav8n-2A0A075B633 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav8n-2A0A075B633 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8n-2A0A075B633 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8n-2A0A075B633 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8n-2A0A075B633 Gm24589-201ENSMUST00000116692 94 ntBASIC15.8■□□□□ 0.12
Trav8n-2A0A075B633 Gm44771-201ENSMUST00000206975 626 ntBASIC15.8■□□□□ 0.12
Trav8n-2A0A075B633 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav8n-2A0A075B633 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8n-2A0A075B633 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8n-2A0A075B633 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8n-2A0A075B633 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav8n-2A0A075B633 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Trav8n-2A0A075B633 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.8■□□□□ 0.12
Trav8n-2A0A075B633 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8n-2A0A075B633 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav8n-2A0A075B633 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8n-2A0A075B633 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8n-2A0A075B633 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trav8n-2A0A075B633 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8n-2A0A075B633 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.79■□□□□ 0.12
Trav8n-2A0A075B633 Gm18115-201ENSMUST00000221209 621 ntBASIC15.79■□□□□ 0.12
Trav8n-2A0A075B633 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8n-2A0A075B633 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8n-2A0A075B633 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8n-2A0A075B633 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8n-2A0A075B633 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8n-2A0A075B633 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8n-2A0A075B633 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav8n-2A0A075B633 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav8n-2A0A075B633 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8n-2A0A075B633 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8n-2A0A075B633 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8n-2A0A075B633 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8n-2A0A075B633 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav8n-2A0A075B633 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav8n-2A0A075B633 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav8n-2A0A075B633 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav8n-2A0A075B633 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav8n-2A0A075B633 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trav8n-2A0A075B633 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav8n-2A0A075B633 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Trav8n-2A0A075B633 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav8n-2A0A075B633 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Trav8n-2A0A075B633 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav8n-2A0A075B633 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trav8n-2A0A075B633 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trav8n-2A0A075B633 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav8n-2A0A075B633 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav8n-2A0A075B633 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.77■□□□□ 0.11
Trav8n-2A0A075B633 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav8n-2A0A075B633 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav8n-2A0A075B633 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav8n-2A0A075B633 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav8n-2A0A075B633 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav8n-2A0A075B633 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav8n-2A0A075B633 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav8n-2A0A075B633 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav8n-2A0A075B633 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav8n-2A0A075B633 Golph3-205ENSMUST00000228671 2842 ntBASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav8n-2A0A075B633 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms