Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Gm10033-202ENSMUST00000211874 928 ntBASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.71□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.71□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15d-1-dv6d-1A0A075B624 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Haglr-201ENSMUST00000100000 2085 ntBASIC14.7□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.7□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.7□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.7□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Zfp783-201ENSMUST00000095946 670 ntBASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.68□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Gm6365-201ENSMUST00000054711 744 ntBASIC14.68□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav15d-1-dv6d-1A0A075B624 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms