Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Gm12922-201ENSMUST00000120626 809 ntBASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7n-4A0A075B620 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav7n-4A0A075B620 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Mir8112-201ENSMUST00000184382 131 ntBASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7n-4A0A075B620 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav7n-4A0A075B620 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.08□□□□□ -0.31
Trav7n-4A0A075B620 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms