Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16d-dv11A0A075B617 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Gm22325-201ENSMUST00000158904 308 ntBASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav16d-dv11A0A075B617 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Gm13216-201ENSMUST00000117145 591 ntBASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav16d-dv11A0A075B617 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 AC093043.1-201ENSMUST00000226700 898 ntBASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav16d-dv11A0A075B617 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav16d-dv11A0A075B617 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav16d-dv11A0A075B617 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav16d-dv11A0A075B617 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.71□□□□□ -0.38
Trav16d-dv11A0A075B617 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav16d-dv11A0A075B617 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
Trav16d-dv11A0A075B617 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav16d-dv11A0A075B617 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms