Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Gm13216-201ENSMUST00000117145 591 ntBASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav1A0A075B5Z4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav1A0A075B5Z4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav1A0A075B5Z4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav1A0A075B5Z4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav1A0A075B5Z4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trav1A0A075B5Z4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav1A0A075B5Z4 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.03■□□□□ 0.16
Trav1A0A075B5Z4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trav1A0A075B5Z4 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.03■□□□□ 0.16
Trav1A0A075B5Z4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trav1A0A075B5Z4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav1A0A075B5Z4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav1A0A075B5Z4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav1A0A075B5Z4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav1A0A075B5Z4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav1A0A075B5Z4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav1A0A075B5Z4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav1A0A075B5Z4 Gm5643-201ENSMUST00000117081 966 ntBASIC16.02■□□□□ 0.16
Trav1A0A075B5Z4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Trav1A0A075B5Z4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav1A0A075B5Z4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav1A0A075B5Z4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Trav1A0A075B5Z4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav1A0A075B5Z4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav1A0A075B5Z4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav1A0A075B5Z4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 Haglr-201ENSMUST00000100000 2085 ntBASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav1A0A075B5Z4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Trav1A0A075B5Z4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trav1A0A075B5Z4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trav1A0A075B5Z4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav1A0A075B5Z4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav1A0A075B5Z4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav1A0A075B5Z4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Trav1A0A075B5Z4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav1A0A075B5Z4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav1A0A075B5Z4 AC135637.1-201ENSMUST00000227750 365 ntBASIC16■□□□□ 0.15
Trav1A0A075B5Z4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav1A0A075B5Z4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav1A0A075B5Z4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trav1A0A075B5Z4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav1A0A075B5Z4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16■□□□□ 0.15
Trav1A0A075B5Z4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav1A0A075B5Z4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav1A0A075B5Z4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav1A0A075B5Z4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav1A0A075B5Z4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Trav1A0A075B5Z4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav1A0A075B5Z4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav1A0A075B5Z4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav1A0A075B5Z4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav1A0A075B5Z4 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.99■□□□□ 0.15
Trav1A0A075B5Z4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav1A0A075B5Z4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms