Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx54Q8K4L0 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx54Q8K4L0 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx54Q8K4L0 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ddx54Q8K4L0 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Ddx54Q8K4L0 Gm21379-201ENSMUST00000179772 1955 ntBASIC6.06□□□□□ -1.44
Ddx54Q8K4L0 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Ddx54Q8K4L0 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Gm13122-201ENSMUST00000118380 453 ntBASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Gm12691-201ENSMUST00000120186 456 ntBASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Gm14619-201ENSMUST00000120480 168 ntBASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Gm12686-201ENSMUST00000120546 397 ntBASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Gm9003-201ENSMUST00000121810 482 ntBASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Gm23167-201ENSMUST00000157155 103 ntBASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Gm24914-201ENSMUST00000157285 313 ntBASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Gm22219-201ENSMUST00000157562 319 ntBASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Gm23865-201ENSMUST00000157723 97 ntBASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Mir6408-201ENSMUST00000183643 91 ntBASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Gm44485-201ENSMUST00000199569 137 ntBASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Gm43393-201ENSMUST00000200147 194 ntBASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Gm46190-201ENSMUST00000219650 427 ntBASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Gm4036-201ENSMUST00000220842 626 ntBASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Snora23-201ENSMUST00000082517 184 ntBASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Gm22997-201ENSMUST00000082845 107 ntBASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 AC123858.1-201ENSMUST00000226948 1874 ntBASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ddx54Q8K4L0 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Gm42869-201ENSMUST00000199953 2121 ntBASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Gm6079-201ENSMUST00000121356 404 ntBASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Gm8289-201ENSMUST00000144814 1182 ntBASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Gm24965-201ENSMUST00000157922 106 ntBASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Gm24819-201ENSMUST00000175094 166 ntBASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Gm9830-201ENSMUST00000178509 357 ntBASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Gm29475-201ENSMUST00000190767 312 ntBASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Gm44609-201ENSMUST00000207157 460 ntBASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Gm9616-201ENSMUST00000221154 781 ntBASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Gm13477-201ENSMUST00000121620 2687 ntBASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Gm43648-201ENSMUST00000197775 2485 ntBASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ddx54Q8K4L0 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Gm24640-201ENSMUST00000116949 126 ntBASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Gm22626-201ENSMUST00000116990 126 ntBASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Gm24909-201ENSMUST00000157290 280 ntBASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Gm24761-201ENSMUST00000179589 127 ntBASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Gm24488-201ENSMUST00000179934 127 ntBASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Gm25701-201ENSMUST00000179988 127 ntBASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Gm22263-201ENSMUST00000180060 104 ntBASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Gm26431-201ENSMUST00000180199 127 ntBASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Gm44322-201ENSMUST00000196830 115 ntBASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 CT030242.2-201ENSMUST00000221588 148 ntBASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Ddx54Q8K4L0 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms