Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm7837-201ENSMUST00000190873 412 ntBASIC5.69□□□□□ -1.5
Trim47Q8C0E3 Gm43749-201ENSMUST00000199345 352 ntBASIC5.69□□□□□ -1.5
Trim47Q8C0E3 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.69□□□□□ -1.5
Trim47Q8C0E3 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim47Q8C0E3 AC126267.1-201ENSMUST00000214282 284 ntBASIC5.69□□□□□ -1.5
Trim47Q8C0E3 AC158622.1-201ENSMUST00000217107 230 ntBASIC5.69□□□□□ -1.5
Trim47Q8C0E3 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.69□□□□□ -1.5
Trim47Q8C0E3 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.69□□□□□ -1.5
Trim47Q8C0E3 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim47Q8C0E3 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim47Q8C0E3 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim47Q8C0E3 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim47Q8C0E3 CT009510.2-203ENSMUST00000226704 2136 ntBASIC5.69□□□□□ -1.5
Trim47Q8C0E3 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim47Q8C0E3 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Gm24121-201ENSMUST00000102029 106 ntBASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Gm22384-201ENSMUST00000158187 104 ntBASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Gm23179-201ENSMUST00000158693 304 ntBASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Gm17153-201ENSMUST00000171314 490 ntBASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Gm25360-201ENSMUST00000178786 191 ntBASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Gm19206-201ENSMUST00000186401 827 ntBASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Gm9775-201ENSMUST00000189402 331 ntBASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Gm29140-201ENSMUST00000190187 476 ntBASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Gm28288-201ENSMUST00000191019 214 ntBASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Gm9134-201ENSMUST00000193186 551 ntBASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Gm17775-201ENSMUST00000198542 258 ntBASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Gm45296-201ENSMUST00000209625 205 ntBASIC5.68□□□□□ -1.5
Trim47Q8C0E3 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.68□□□□□ -1.5
Trim47Q8C0E3 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.68□□□□□ -1.5
Trim47Q8C0E3 AC159709.1-201ENSMUST00000220445 349 ntBASIC5.68□□□□□ -1.5
Trim47Q8C0E3 AC154282.1-201ENSMUST00000223154 265 ntBASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Mir30b-201ENSMUST00000083542 96 ntBASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim47Q8C0E3 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim47Q8C0E3 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm381-201ENSMUST00000117443 2037 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm14086-201ENSMUST00000117152 173 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm14803-201ENSMUST00000117163 361 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm11633-201ENSMUST00000118176 444 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm14566-201ENSMUST00000118915 321 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm5937-201ENSMUST00000119715 643 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm23197-201ENSMUST00000158809 112 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm10087-201ENSMUST00000167650 330 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Spin2g-201ENSMUST00000178425 687 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Mir7031-201ENSMUST00000183860 65 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm38011-201ENSMUST00000193312 279 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm20039-201ENSMUST00000210329 394 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 AC163357.1-201ENSMUST00000220847 233 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 AC117240.2-201ENSMUST00000220921 263 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm9512-201ENSMUST00000223112 497 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm22741-201ENSMUST00000083438 165 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm23095-201ENSMUST00000083446 107 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm5670-201ENSMUST00000093546 372 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim47Q8C0E3 AC153526.2-201ENSMUST00000218206 2031 ntBASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim47Q8C0E3 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim47Q8C0E3 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.66□□□□□ -1.5
Trim47Q8C0E3 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Trim47Q8C0E3 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim47Q8C0E3 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Trim47Q8C0E3 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms