Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC2.95□□□□□ -1.94
Scn10aQ6QIY3 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC2.95□□□□□ -1.94
Scn10aQ6QIY3 Gm24497-201ENSMUST00000177868 191 ntBASIC2.95□□□□□ -1.94
Scn10aQ6QIY3 Gm22108-201ENSMUST00000177961 106 ntBASIC2.95□□□□□ -1.94
Scn10aQ6QIY3 Gm24798-201ENSMUST00000179334 106 ntBASIC2.95□□□□□ -1.94
Scn10aQ6QIY3 Gm25939-201ENSMUST00000179876 191 ntBASIC2.95□□□□□ -1.94
Scn10aQ6QIY3 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC2.95□□□□□ -1.94
Scn10aQ6QIY3 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Scn10aQ6QIY3 Gm23444-201ENSMUST00000082922 191 ntBASIC2.95□□□□□ -1.94
Scn10aQ6QIY3 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Scn10aQ6QIY3 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC2.95□□□□□ -1.94
Scn10aQ6QIY3 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Scn10aQ6QIY3 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.95□□□□□ -1.94
Scn10aQ6QIY3 Gm3956-201ENSMUST00000164882 2560 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Gm15421-202ENSMUST00000118224 399 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Gm16017-201ENSMUST00000119834 208 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Mup-ps21-201ENSMUST00000119998 448 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Gm23585-201ENSMUST00000157656 102 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Gm20450-201ENSMUST00000173652 147 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Gm19080-201ENSMUST00000196082 550 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Gm2676-201ENSMUST00000207279 606 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 AC173345.3-201ENSMUST00000221245 1093 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 AF357341-201ENSMUST00000083088 75 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Gm14890-201ENSMUST00000117660 676 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Gm11433-201ENSMUST00000118318 228 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Gm13349-201ENSMUST00000118436 411 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Gm14541-201ENSMUST00000118985 157 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Gm8807-201ENSMUST00000179328 492 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Gm37946-201ENSMUST00000192064 347 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Gm45588-201ENSMUST00000211213 630 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 AC154510.1-201ENSMUST00000223925 737 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Gm23264-201ENSMUST00000083372 107 ntBASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Scn10aQ6QIY3 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 Gm38332-201ENSMUST00000194189 147 ntBASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 AC124399.1-201ENSMUST00000218334 590 ntBASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 Gm25130-201ENSMUST00000082650 156 ntBASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 Gm37626-201ENSMUST00000194332 4563 ntBASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 Gm36969-201ENSMUST00000194551 2809 ntBASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Scn10aQ6QIY3 Gm25377-201ENSMUST00000104334 129 ntBASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 Gm15074-201ENSMUST00000117603 936 ntBASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 Gm14791-201ENSMUST00000119061 1166 ntBASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 Gm22073-201ENSMUST00000122668 189 ntBASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 Gm27535-201ENSMUST00000183814 157 ntBASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 Mir7026-201ENSMUST00000184384 67 ntBASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 Gm18493-201ENSMUST00000192084 1612 ntBASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 Gm36960-201ENSMUST00000195491 2035 ntBASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 Gm14159-201ENSMUST00000119832 451 ntBASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC2.92□□□□□ -1.94
Scn10aQ6QIY3 Gm23409-201ENSMUST00000158516 237 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms