Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm12900-201ENSMUST00000120919 573 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Gm7308-201ENSMUST00000121087 447 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Gm12327-201ENSMUST00000121729 1168 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Gm11506-201ENSMUST00000122414 470 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Gm12998-201ENSMUST00000122445 789 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Gm22961-201ENSMUST00000157964 106 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Mup-ps7-201ENSMUST00000178292 545 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Mup-ps8-201ENSMUST00000178663 545 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Mup-ps9-201ENSMUST00000178847 545 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Mup-ps6-201ENSMUST00000179564 545 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Gm24968-201ENSMUST00000179817 107 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Gm27921-201ENSMUST00000183968 108 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Gm4854-201ENSMUST00000185902 574 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Gm38201-201ENSMUST00000192143 387 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Gm37791-201ENSMUST00000195081 286 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Gm38018-201ENSMUST00000195651 540 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Gm18429-201ENSMUST00000198707 421 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Gm43224-201ENSMUST00000201567 898 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Gm44720-201ENSMUST00000206076 260 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 AC125523.1-201ENSMUST00000228018 934 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Gm25205-201ENSMUST00000082841 103 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Gm25792-201ENSMUST00000083289 100 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Gm21286-201ENSMUST00000098035 545 ntBASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
Trav3-3Q5R1C3 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm13873-201ENSMUST00000119208 427 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm22480-201ENSMUST00000122568 128 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 n-R5s192-201ENSMUST00000122577 119 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm24914-201ENSMUST00000157285 313 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm22225-201ENSMUST00000157358 278 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm22339-201ENSMUST00000157718 62 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm29330-201ENSMUST00000190032 699 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm28098-201ENSMUST00000191361 699 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm37866-201ENSMUST00000191950 696 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm17951-201ENSMUST00000198536 496 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm45023-201ENSMUST00000207951 379 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm44548-201ENSMUST00000208929 192 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm18585-201ENSMUST00000215197 556 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm46233-201ENSMUST00000217831 449 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm10237-201ENSMUST00000078393 273 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm25403-201ENSMUST00000082971 143 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm38286-201ENSMUST00000195128 3105 ntBASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trav3-3Q5R1C3 Gm44562-201ENSMUST00000207194 1347 ntBASIC2.43□□□□□ -2.02
Trav3-3Q5R1C3 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.43□□□□□ -2.02
Trav3-3Q5R1C3 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
Trav3-3Q5R1C3 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
Trav3-3Q5R1C3 Gm25765-201ENSMUST00000104100 132 ntBASIC2.43□□□□□ -2.02
Trav3-3Q5R1C3 Gm649-201ENSMUST00000117284 1054 ntBASIC2.43□□□□□ -2.02
Trav3-3Q5R1C3 Gm15025-201ENSMUST00000118434 418 ntBASIC2.43□□□□□ -2.02
Trav3-3Q5R1C3 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trav3-3Q5R1C3 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.43□□□□□ -2.02
Trav3-3Q5R1C3 Gm22957-201ENSMUST00000122511 123 ntBASIC2.43□□□□□ -2.02
Trav3-3Q5R1C3 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC2.43□□□□□ -2.02
Trav3-3Q5R1C3 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC2.43□□□□□ -2.02
Trav3-3Q5R1C3 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms