Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Gm15161-201ENSMUST00000117340 387 ntBASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Gm9850-201ENSMUST00000117916 227 ntBASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Gm12268-201ENSMUST00000118398 442 ntBASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Gm17117-201ENSMUST00000163665 299 ntBASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Gm28628-201ENSMUST00000187006 264 ntBASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Gm6501-201ENSMUST00000187178 916 ntBASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Gm28629-201ENSMUST00000187309 263 ntBASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Gm44425-201ENSMUST00000203739 429 ntBASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Gm44157-201ENSMUST00000204720 410 ntBASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Gm45380-201ENSMUST00000210465 315 ntBASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 AC154257.2-201ENSMUST00000224166 340 ntBASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Upf3bQ3ULL6 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Gm24376-201ENSMUST00000104399 127 ntBASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Gm14795-201ENSMUST00000118461 471 ntBASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Gm7308-201ENSMUST00000121087 447 ntBASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Gm22322-201ENSMUST00000157151 111 ntBASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Gm24520-201ENSMUST00000179510 110 ntBASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Gm28390-201ENSMUST00000185212 700 ntBASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Gm8242-202ENSMUST00000193056 475 ntBASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Gm32447-201ENSMUST00000194265 697 ntBASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 AC160970.1-201ENSMUST00000219311 475 ntBASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 AC132260.2-201ENSMUST00000224482 344 ntBASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Gm23058-201ENSMUST00000093703 107 ntBASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.13□□□□□ -1.91
Upf3bQ3ULL6 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Gm24951-201ENSMUST00000102182 109 ntBASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Gm16445-201ENSMUST00000120399 714 ntBASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Gm7350-201ENSMUST00000120964 636 ntBASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Gm28788-201ENSMUST00000189717 375 ntBASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Gm29558-201ENSMUST00000190134 375 ntBASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Gm45860-201ENSMUST00000212700 334 ntBASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Mir21a-201ENSMUST00000083521 92 ntBASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.12□□□□□ -1.91
Upf3bQ3ULL6 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 Mir291a-201ENSMUST00000104815 82 ntBASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 Gm13574-201ENSMUST00000120482 394 ntBASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 Gm14800-201ENSMUST00000122084 1272 ntBASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 Gm23380-201ENSMUST00000158448 103 ntBASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 Gm9587-201ENSMUST00000172449 454 ntBASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 Gm27700-201ENSMUST00000185003 81 ntBASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 Gm37428-201ENSMUST00000193886 137 ntBASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC3.11□□□□□ -1.91
Upf3bQ3ULL6 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms