Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sox9Q04887 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Sox9Q04887 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sox9Q04887 AC137842.3-201ENSMUST00000228855 2397 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sox9Q04887 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Sox9Q04887 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sox9Q04887 Gm37999-201ENSMUST00000195178 1809 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox9Q04887 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sox9Q04887 Gm22656-201ENSMUST00000104199 171 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox9Q04887 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Gm11784-201ENSMUST00000118568 474 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Gm14049-201ENSMUST00000121009 636 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Gm14804-201ENSMUST00000122322 508 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.7□□□□□ -1.66
Sox9Q04887 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC4.7□□□□□ -1.66
Sox9Q04887 Gm23167-201ENSMUST00000157155 103 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Gm27013-201ENSMUST00000182441 1024 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Gm27940-201ENSMUST00000184449 98 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Gm43624-201ENSMUST00000197368 180 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sox9Q04887 Gm7407-201ENSMUST00000208301 568 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Gm20039-201ENSMUST00000210329 394 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Gm45402-201ENSMUST00000211796 223 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 AC166358.10-201ENSMUST00000220556 144 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.7□□□□□ -1.66
Sox9Q04887 AC147633.1-201ENSMUST00000225134 259 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sox9Q04887 Gm26128-201ENSMUST00000083170 110 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Gm22155-201ENSMUST00000083836 162 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sox9Q04887 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sox9Q04887 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sox9Q04887 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sox9Q04887 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sox9Q04887 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox9Q04887 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.7□□□□□ -1.66
Sox9Q04887 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sox9Q04887 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sox9Q04887 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox9Q04887 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sox9Q04887 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sox9Q04887 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sox9Q04887 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sox9Q04887 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sox9Q04887 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sox9Q04887 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sox9Q04887 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sox9Q04887 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sox9Q04887 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sox9Q04887 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Sox9Q04887 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sox9Q04887 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sox9Q04887 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Sox9Q04887 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Sox9Q04887 Gm25168-201ENSMUST00000104189 132 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 Gm24275-201ENSMUST00000116780 146 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 Gm11386-201ENSMUST00000117761 347 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 Gm14566-201ENSMUST00000118915 321 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 Gm25781-201ENSMUST00000122527 84 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sox9Q04887 Gm25666-201ENSMUST00000157702 107 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 Gm24419-201ENSMUST00000157875 332 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sox9Q04887 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Sox9Q04887 Gm18828-202ENSMUST00000181035 310 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 Gm27695-201ENSMUST00000184301 91 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 Gm29610-201ENSMUST00000187749 453 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC4.69□□□□□ -1.66
Sox9Q04887 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC4.69□□□□□ -1.66
Sox9Q04887 Gm42594-201ENSMUST00000199511 246 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.69□□□□□ -1.66
Sox9Q04887 Gm46190-201ENSMUST00000219650 427 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 Gm18120-201ENSMUST00000220079 511 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 AC116589.7-201ENSMUST00000221061 239 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 AC164117.1-201ENSMUST00000221726 239 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 Gm5265-201ENSMUST00000076828 342 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 Gm23404-201ENSMUST00000082543 97 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 Gm23515-201ENSMUST00000082829 107 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sox9Q04887 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sox9Q04887 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sox9Q04887 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sox9Q04887 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sox9Q04887 Gm10933-201ENSMUST00000221891 1861 ntBASIC4.69□□□□□ -1.66
Sox9Q04887 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 116.9 ms