Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm43090-201ENSMUST00000202459 314 ntBASIC2.49□□□□□ -2.01
Nkx3-1P97436 Gm34314-201ENSMUST00000203622 367 ntBASIC2.49□□□□□ -2.01
Nkx3-1P97436 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.49□□□□□ -2.01
Nkx3-1P97436 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC2.49□□□□□ -2.01
Nkx3-1P97436 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.49□□□□□ -2.01
Nkx3-1P97436 Gm10088-201ENSMUST00000074116 423 ntBASIC2.49□□□□□ -2.01
Nkx3-1P97436 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Nkx3-1P97436 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Nkx3-1P97436 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Nkx3-1P97436 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.49□□□□□ -2.01
Nkx3-1P97436 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.48□□□□□ -2.01
Nkx3-1P97436 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Nkx3-1P97436 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Nkx3-1P97436 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Nkx3-1P97436 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.48□□□□□ -2.01
Nkx3-1P97436 Gm7853-201ENSMUST00000100708 478 ntBASIC2.48□□□□□ -2.01
Nkx3-1P97436 Gm3940-201ENSMUST00000105087 432 ntBASIC2.48□□□□□ -2.01
Nkx3-1P97436 Gm14821-201ENSMUST00000121975 435 ntBASIC2.48□□□□□ -2.01
Nkx3-1P97436 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Nkx3-1P97436 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Nkx3-1P97436 Gm25528-201ENSMUST00000180264 132 ntBASIC2.48□□□□□ -2.01
Nkx3-1P97436 Gm26928-201ENSMUST00000182674 572 ntBASIC2.48□□□□□ -2.01
Nkx3-1P97436 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.48□□□□□ -2.01
Nkx3-1P97436 Gm37193-201ENSMUST00000193087 513 ntBASIC2.48□□□□□ -2.01
Nkx3-1P97436 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Nkx3-1P97436 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.48□□□□□ -2.01
Nkx3-1P97436 Gm42578-201ENSMUST00000199960 194 ntBASIC2.48□□□□□ -2.01
Nkx3-1P97436 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.48□□□□□ -2.01
Nkx3-1P97436 AC121966.1-201ENSMUST00000221458 282 ntBASIC2.48□□□□□ -2.01
Nkx3-1P97436 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.48□□□□□ -2.01
Nkx3-1P97436 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Nkx3-1P97436 AC160958.1-201ENSMUST00000224833 368 ntBASIC2.48□□□□□ -2.01
Nkx3-1P97436 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Nkx3-1P97436 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.48□□□□□ -2.01
Nkx3-1P97436 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Nkx3-1P97436 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Nkx3-1P97436 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Nkx3-1P97436 Gm36962-201ENSMUST00000192114 1761 ntBASIC2.48□□□□□ -2.01
Nkx3-1P97436 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Nkx3-1P97436 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Nkx3-1P97436 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Nkx3-1P97436 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Nkx3-1P97436 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm19335-201ENSMUST00000195836 2069 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm7327-201ENSMUST00000120925 652 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm13210-201ENSMUST00000121483 273 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm15065-201ENSMUST00000121699 273 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm24879-201ENSMUST00000158386 143 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Nkx3-1P97436 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm9587-201ENSMUST00000172449 454 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm25525-201ENSMUST00000177701 107 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm26178-201ENSMUST00000177706 107 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm26465-201ENSMUST00000178517 107 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm24317-201ENSMUST00000178536 107 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm25021-201ENSMUST00000179184 107 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm22995-201ENSMUST00000179670 107 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm24424-201ENSMUST00000179714 107 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm24389-201ENSMUST00000179962 107 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm25672-201ENSMUST00000180111 107 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Mir7014-201ENSMUST00000183853 63 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm27796-201ENSMUST00000183863 261 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Mir6401-201ENSMUST00000184499 109 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm29163-201ENSMUST00000188029 107 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm18692-201ENSMUST00000193047 511 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.47□□□□□ -2.01
Nkx3-1P97436 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm44256-201ENSMUST00000203304 335 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm19244-201ENSMUST00000204340 253 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm44849-201ENSMUST00000207595 484 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm18015-201ENSMUST00000214879 316 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm17872-201ENSMUST00000222550 532 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm23815-201ENSMUST00000083231 107 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm24446-201ENSMUST00000083982 156 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Gm23520-201ENSMUST00000093736 107 ntBASIC2.47□□□□□ -2.01
Nkx3-1P97436 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Nkx3-1P97436 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
Nkx3-1P97436 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Nkx3-1P97436 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Nkx3-1P97436 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
Nkx3-1P97436 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Nkx3-1P97436 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Nkx3-1P97436 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Nkx3-1P97436 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Nkx3-1P97436 Gm25466-201ENSMUST00000103995 132 ntBASIC2.46□□□□□ -2.02
Nkx3-1P97436 Gm24122-201ENSMUST00000104107 132 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms