Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Shmt1P50431 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Shmt1P50431 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.53□□□□□ -1.69
Shmt1P50431 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Shmt1P50431 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.52□□□□□ -1.69
Shmt1P50431 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.52□□□□□ -1.69
Shmt1P50431 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Shmt1P50431 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC4.52□□□□□ -1.69
Shmt1P50431 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Shmt1P50431 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Shmt1P50431 Gm14594-201ENSMUST00000118052 537 ntBASIC4.52□□□□□ -1.69
Shmt1P50431 Gm14590-201ENSMUST00000118934 537 ntBASIC4.52□□□□□ -1.69
Shmt1P50431 Gm14927-201ENSMUST00000120283 454 ntBASIC4.52□□□□□ -1.69
Shmt1P50431 Gm11398-201ENSMUST00000120330 320 ntBASIC4.52□□□□□ -1.69
Shmt1P50431 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC4.52□□□□□ -1.69
Shmt1P50431 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC4.52□□□□□ -1.69
Shmt1P50431 Mir5134-201ENSMUST00000175529 78 ntBASIC4.52□□□□□ -1.69
Shmt1P50431 Gm14596-201ENSMUST00000180268 537 ntBASIC4.52□□□□□ -1.69
Shmt1P50431 Gm14595-201ENSMUST00000180335 537 ntBASIC4.52□□□□□ -1.69
Shmt1P50431 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC4.52□□□□□ -1.69
Shmt1P50431 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Shmt1P50431 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.52□□□□□ -1.69
Shmt1P50431 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC4.52□□□□□ -1.69
Shmt1P50431 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC4.52□□□□□ -1.69
Shmt1P50431 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.52□□□□□ -1.69
Shmt1P50431 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Shmt1P50431 Gm44543-201ENSMUST00000209136 396 ntBASIC4.52□□□□□ -1.69
Shmt1P50431 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Shmt1P50431 Gm18120-201ENSMUST00000220079 511 ntBASIC4.52□□□□□ -1.69
Shmt1P50431 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.52□□□□□ -1.69
Shmt1P50431 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Shmt1P50431 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.52□□□□□ -1.69
Shmt1P50431 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Shmt1P50431 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Shmt1P50431 Gm15975-201ENSMUST00000122385 1402 ntBASIC4.52□□□□□ -1.69
Shmt1P50431 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Shmt1P50431 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Shmt1P50431 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Shmt1P50431 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.52□□□□□ -1.69
Shmt1P50431 Gm37761-201ENSMUST00000194989 2098 ntBASIC4.52□□□□□ -1.69
Shmt1P50431 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.51□□□□□ -1.69
Shmt1P50431 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Shmt1P50431 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Shmt1P50431 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
Shmt1P50431 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Shmt1P50431 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Shmt1P50431 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Shmt1P50431 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Shmt1P50431 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Shmt1P50431 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.51□□□□□ -1.69
Shmt1P50431 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Shmt1P50431 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Shmt1P50431 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.51□□□□□ -1.69
Shmt1P50431 Gm24788-201ENSMUST00000104283 156 ntBASIC4.51□□□□□ -1.69
Shmt1P50431 Gm15267-201ENSMUST00000120888 464 ntBASIC4.51□□□□□ -1.69
Shmt1P50431 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Shmt1P50431 Gm26373-201ENSMUST00000157833 103 ntBASIC4.51□□□□□ -1.69
Shmt1P50431 Gm24419-201ENSMUST00000157875 332 ntBASIC4.51□□□□□ -1.69
Shmt1P50431 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Shmt1P50431 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Shmt1P50431 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Shmt1P50431 Gm38098-201ENSMUST00000194115 241 ntBASIC4.51□□□□□ -1.69
Shmt1P50431 Gm6510-201ENSMUST00000195916 574 ntBASIC4.51□□□□□ -1.69
Shmt1P50431 Gm43586-201ENSMUST00000195948 310 ntBASIC4.51□□□□□ -1.69
Shmt1P50431 Gm43649-201ENSMUST00000196596 391 ntBASIC4.51□□□□□ -1.69
Shmt1P50431 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.51□□□□□ -1.69
Shmt1P50431 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC4.51□□□□□ -1.69
Shmt1P50431 AC122905.2-201ENSMUST00000220325 269 ntBASIC4.51□□□□□ -1.69
Shmt1P50431 Gm46996-201ENSMUST00000220924 408 ntBASIC4.51□□□□□ -1.69
Shmt1P50431 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.51□□□□□ -1.69
Shmt1P50431 AC131029.2-202ENSMUST00000228430 496 ntBASIC4.51□□□□□ -1.69
Shmt1P50431 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Shmt1P50431 Olfr203-201ENSMUST00000089305 924 ntBASIC4.51□□□□□ -1.69
Shmt1P50431 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Shmt1P50431 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
Shmt1P50431 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.51□□□□□ -1.69
Shmt1P50431 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.51□□□□□ -1.69
Shmt1P50431 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Shmt1P50431 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Shmt1P50431 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Shmt1P50431 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Shmt1P50431 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Shmt1P50431 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.5□□□□□ -1.69
Shmt1P50431 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
Shmt1P50431 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.5□□□□□ -1.69
Shmt1P50431 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Shmt1P50431 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Shmt1P50431 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Shmt1P50431 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Shmt1P50431 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Shmt1P50431 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.5□□□□□ -1.69
Shmt1P50431 Gm11432-201ENSMUST00000117334 231 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Gm8666-201ENSMUST00000117517 292 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Gm9059-201ENSMUST00000118319 183 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Gm14001-201ENSMUST00000118847 247 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Gm12053-201ENSMUST00000119022 252 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Gm13475-201ENSMUST00000119290 234 ntBASIC4.5□□□□□ -1.69
Shmt1P50431 Gm15142-201ENSMUST00000121013 856 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms