Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Pde6bP23440 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Pde6bP23440 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Pde6bP23440 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Pde6bP23440 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Pde6bP23440 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Pde6bP23440 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Pde6bP23440 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Pde6bP23440 Gm11313-201ENSMUST00000118779 432 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Gm12771-201ENSMUST00000120246 135 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Gm23171-201ENSMUST00000157159 264 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Gm22277-201ENSMUST00000157204 277 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Gm24780-201ENSMUST00000157635 143 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Gm26085-201ENSMUST00000157900 116 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Gm24584-201ENSMUST00000157972 107 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Gm25907-201ENSMUST00000158486 125 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Gm4761-201ENSMUST00000178086 582 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Gm22286-201ENSMUST00000179708 107 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Pde6bP23440 Gm22633-201ENSMUST00000179834 107 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Mir6418-201ENSMUST00000185075 115 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Gm42643-201ENSMUST00000200504 279 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Gm44419-201ENSMUST00000203338 229 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Gm45236-201ENSMUST00000208632 229 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 AC158955.1-201ENSMUST00000227140 385 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Gm22749-201ENSMUST00000082490 107 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Gm24856-201ENSMUST00000082809 107 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Gm25258-201ENSMUST00000083049 107 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Gm24535-201ENSMUST00000083140 107 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Gm22352-201ENSMUST00000083917 107 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Pde6bP23440 Gm21379-201ENSMUST00000179772 1955 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
Pde6bP23440 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Pde6bP23440 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Pde6bP23440 Gm44321-201ENSMUST00000204262 2855 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Pde6bP23440 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Pde6bP23440 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.32□□□□□ -1.56
Pde6bP23440 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Pde6bP23440 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Pde6bP23440 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Pde6bP23440 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Pde6bP23440 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Pde6bP23440 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Pde6bP23440 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Pde6bP23440 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Pde6bP23440 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Pde6bP23440 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Pde6bP23440 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Pde6bP23440 Gm25595-201ENSMUST00000102273 97 ntBASIC5.31□□□□□ -1.56
Pde6bP23440 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Pde6bP23440 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC5.31□□□□□ -1.56
Pde6bP23440 Gm15981-201ENSMUST00000119196 457 ntBASIC5.31□□□□□ -1.56
Pde6bP23440 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC5.31□□□□□ -1.56
Pde6bP23440 Gm25966-201ENSMUST00000157169 117 ntBASIC5.31□□□□□ -1.56
Pde6bP23440 Gm24689-201ENSMUST00000157760 104 ntBASIC5.31□□□□□ -1.56
Pde6bP23440 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.31□□□□□ -1.56
Pde6bP23440 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Pde6bP23440 Gm9830-201ENSMUST00000178509 357 ntBASIC5.31□□□□□ -1.56
Pde6bP23440 Gm24100-201ENSMUST00000178592 79 ntBASIC5.31□□□□□ -1.56
Pde6bP23440 Gm24137-201ENSMUST00000180055 79 ntBASIC5.31□□□□□ -1.56
Pde6bP23440 Gm22391-201ENSMUST00000180356 79 ntBASIC5.31□□□□□ -1.56
Pde6bP23440 Gm27818-201ENSMUST00000184536 159 ntBASIC5.31□□□□□ -1.56
Pde6bP23440 Gm6075-201ENSMUST00000186816 486 ntBASIC5.31□□□□□ -1.56
Pde6bP23440 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Pde6bP23440 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.31□□□□□ -1.56
Pde6bP23440 Gm6051-201ENSMUST00000201529 352 ntBASIC5.31□□□□□ -1.56
Pde6bP23440 Gm44402-201ENSMUST00000203677 238 ntBASIC5.31□□□□□ -1.56
Pde6bP23440 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC5.31□□□□□ -1.56
Pde6bP23440 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.31□□□□□ -1.56
Pde6bP23440 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC5.31□□□□□ -1.56
Pde6bP23440 AC156559.1-201ENSMUST00000224158 222 ntBASIC5.31□□□□□ -1.56
Pde6bP23440 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Pde6bP23440 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Pde6bP23440 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Pde6bP23440 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC5.31□□□□□ -1.56
Pde6bP23440 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.31□□□□□ -1.56
Pde6bP23440 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.31□□□□□ -1.56
Pde6bP23440 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Pde6bP23440 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Pde6bP23440 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Pde6bP23440 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Pde6bP23440 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Pde6bP23440 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Pde6bP23440 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.3□□□□□ -1.56
Pde6bP23440 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Pde6bP23440 Gm37862-201ENSMUST00000193079 2533 ntBASIC5.3□□□□□ -1.56
Pde6bP23440 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Pde6bP23440 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.3□□□□□ -1.56
Pde6bP23440 Gm36951-201ENSMUST00000193840 2687 ntBASIC5.3□□□□□ -1.56
Pde6bP23440 Gm12112-201ENSMUST00000117772 231 ntBASIC5.3□□□□□ -1.56
Pde6bP23440 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.3□□□□□ -1.56
Pde6bP23440 Gm24113-201ENSMUST00000157477 276 ntBASIC5.3□□□□□ -1.56
Pde6bP23440 Gm7953-201ENSMUST00000168278 469 ntBASIC5.3□□□□□ -1.56
Pde6bP23440 Gm24464-201ENSMUST00000179697 107 ntBASIC5.3□□□□□ -1.56
Pde6bP23440 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms