Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Gm13210-201ENSMUST00000121483 273 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Gm15065-201ENSMUST00000121699 273 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Gm25058-201ENSMUST00000157365 128 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Gm25655-201ENSMUST00000158465 290 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Sdc1P18828 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Sdc1P18828 Gm25534-201ENSMUST00000175365 125 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Gm21241-201ENSMUST00000179551 934 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Sdc1P18828 Gm29259-201ENSMUST00000186396 694 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Gm28785-201ENSMUST00000187478 379 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Sdc1P18828 Gm29576-201ENSMUST00000188020 678 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Sdc1P18828 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Sdc1P18828 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Sdc1P18828 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Sdc1P18828 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Sdc1P18828 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Sdc1P18828 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
Sdc1P18828 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Sdc1P18828 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Sdc1P18828 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Sdc1P18828 Gm28354-201ENSMUST00000190904 678 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Gm20819-201ENSMUST00000191091 925 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Gm20871-201ENSMUST00000191322 931 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Sdc1P18828 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Sdc1P18828 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC2.65□□□□□ -1.99
Sdc1P18828 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.65□□□□□ -1.99
Sdc1P18828 Gm43227-201ENSMUST00000202239 677 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Sdc1P18828 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Sdc1P18828 Gm4921-201ENSMUST00000219804 992 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC2.65□□□□□ -1.99
Sdc1P18828 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Sdc1P18828 Gm19786-201ENSMUST00000222589 580 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 AC158392.2-201ENSMUST00000225402 969 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 AC154727.1-201ENSMUST00000226537 499 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Sdc1P18828 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Sdc1P18828 Olfr512-201ENSMUST00000074730 1056 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Gm7099-201ENSMUST00000080066 554 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
Sdc1P18828 Gm25007-201ENSMUST00000083808 133 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Sdc1P18828 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Sdc1P18828 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Sdc1P18828 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
Sdc1P18828 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Sdc1P18828 Gm15902-202ENSMUST00000219623 3477 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
Sdc1P18828 Gm7974-201ENSMUST00000117154 408 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Gm13614-201ENSMUST00000117306 503 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Gm14877-201ENSMUST00000119803 478 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Gm14913-201ENSMUST00000120011 1093 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Gm14599-201ENSMUST00000120469 474 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Mup-ps1-201ENSMUST00000120720 544 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Gm14129-201ENSMUST00000122436 291 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Gm23463-201ENSMUST00000122468 99 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Gm25807-201ENSMUST00000122783 305 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC2.64□□□□□ -1.99
Sdc1P18828 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.64□□□□□ -1.99
Sdc1P18828 Gm23473-201ENSMUST00000158883 116 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Sdc1P18828 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.64□□□□□ -1.99
Sdc1P18828 Gm13147-202ENSMUST00000177526 1173 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Sdc1P18828 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Sdc1P18828 Mir6405-201ENSMUST00000184584 124 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Gm28685-201ENSMUST00000187545 1101 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Gm28534-201ENSMUST00000187744 676 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Gm29479-201ENSMUST00000190352 455 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Gm43493-201ENSMUST00000199837 202 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Gm45192-201ENSMUST00000206749 283 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Gm7675-201ENSMUST00000208828 686 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Gm7786-201ENSMUST00000210494 436 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.64□□□□□ -1.99
Sdc1P18828 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Sdc1P18828 Gm46327-201ENSMUST00000218240 365 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Gm17872-201ENSMUST00000222550 532 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 AC124746.2-201ENSMUST00000226594 427 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Sdc1P18828 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Sdc1P18828 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Sdc1P18828 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Sdc1P18828 Gm25856-201ENSMUST00000082786 75 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Gm25202-201ENSMUST00000082838 191 ntBASIC2.64□□□□□ -1.99
Sdc1P18828 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Sdc1P18828 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
Sdc1P18828 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.64□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms