Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Gm23118-201ENSMUST00000122657 187 ntBASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Gm22986-201ENSMUST00000122753 130 ntBASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Gm22390-201ENSMUST00000157588 325 ntBASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Gm25369-201ENSMUST00000158848 132 ntBASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Mir713-201ENSMUST00000178651 108 ntBASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Gm6680-201ENSMUST00000192789 950 ntBASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Gm37001-201ENSMUST00000193377 190 ntBASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Gm42465-201ENSMUST00000197036 492 ntBASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Gm42453-201ENSMUST00000200477 409 ntBASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Gm43198-201ENSMUST00000200927 326 ntBASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Gm43232-201ENSMUST00000201346 364 ntBASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trav13d-3J3QMG8 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm14445-201ENSMUST00000117051 1484 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm23577-201ENSMUST00000103950 110 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm23271-201ENSMUST00000104052 124 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm12225-201ENSMUST00000117995 298 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm11352-201ENSMUST00000119264 517 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm14887-201ENSMUST00000119522 663 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm22531-201ENSMUST00000158819 140 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm23365-201ENSMUST00000175019 125 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm25960-201ENSMUST00000175110 125 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm44453-201ENSMUST00000175161 126 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm25195-201ENSMUST00000177656 126 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm8649-201ENSMUST00000181799 233 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm19774-201ENSMUST00000190667 114 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm37732-201ENSMUST00000194377 316 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm43556-201ENSMUST00000196186 681 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm43114-201ENSMUST00000198298 343 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm19457-201ENSMUST00000200995 448 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm19649-201ENSMUST00000201126 822 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm45049-201ENSMUST00000207586 591 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm17850-201ENSMUST00000210023 1154 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm45796-201ENSMUST00000212483 114 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 AC120394.1-201ENSMUST00000217153 351 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm25792-201ENSMUST00000083289 100 ntBASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav13d-3J3QMG8 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm13650-201ENSMUST00000117729 433 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm7219-201ENSMUST00000119619 297 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm14815-201ENSMUST00000120060 488 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm14240-201ENSMUST00000120353 546 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm22988-201ENSMUST00000122759 144 ntBASIC3.29□□□□□ -1.88
Trav13d-3J3QMG8 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms