Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm16358-201ENSMUST00000146046 210 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm22725-201ENSMUST00000158092 110 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Mir5112-201ENSMUST00000174897 60 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm26983-201ENSMUST00000182051 388 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm34176-201ENSMUST00000192621 474 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm37070-201ENSMUST00000193272 460 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm3010-201ENSMUST00000198805 448 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm43393-201ENSMUST00000200147 194 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Mir7227-201ENSMUST00000200408 59 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm43925-201ENSMUST00000203498 206 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm18602-201ENSMUST00000209794 851 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 AL450317.1-201ENSMUST00000213941 291 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm9318-201ENSMUST00000222444 438 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm7768-201ENSMUST00000222988 597 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 AL807824.1-201ENSMUST00000223151 183 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 AC161884.2-201ENSMUST00000224513 227 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 AC154583.1-201ENSMUST00000224788 655 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm10916-201ENSMUST00000080330 483 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm24706-201ENSMUST00000082806 137 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Mir504-201ENSMUST00000093602 79 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Mir466j-201ENSMUST00000116876 122 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm11790-201ENSMUST00000119569 455 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm15106-201ENSMUST00000119691 821 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm13488-201ENSMUST00000120419 179 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm13867-201ENSMUST00000120844 395 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm11430-201ENSMUST00000121317 217 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm22843-201ENSMUST00000157710 134 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm23779-201ENSMUST00000157938 64 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm25718-201ENSMUST00000158632 118 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm10319-202ENSMUST00000159439 846 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm7953-201ENSMUST00000168278 469 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm8214-201ENSMUST00000172123 351 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm27233-201ENSMUST00000184030 307 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm2497-201ENSMUST00000189539 601 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm28769-201ENSMUST00000190176 615 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm43739-201ENSMUST00000198294 307 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm44016-201ENSMUST00000203463 164 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm45200-201ENSMUST00000207434 919 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 AC151971.3-201ENSMUST00000214694 404 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 AC160031.2-201ENSMUST00000218242 274 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 CT572985.2-201ENSMUST00000220496 211 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Olfr151-202ENSMUST00000221099 929 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 AC165092.3-201ENSMUST00000223602 282 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 AV026068-231ENSMUST00000225862 482 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm24042-201ENSMUST00000083114 103 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm5670-201ENSMUST00000093546 372 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm25821-201ENSMUST00000093657 133 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.32□□□□□ -1.72
Pcdh1F7BJK1 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms