Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
Col6a4A2AX52 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Col6a4A2AX52 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.05□□□□□ -2.08
Col6a4A2AX52 Gm25421-201ENSMUST00000104218 164 ntBASIC2.05□□□□□ -2.08
Col6a4A2AX52 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
Col6a4A2AX52 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC2.05□□□□□ -2.08
Col6a4A2AX52 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.05□□□□□ -2.08
Col6a4A2AX52 Gm11446-201ENSMUST00000121319 866 ntBASIC2.05□□□□□ -2.08
Col6a4A2AX52 Gm26187-201ENSMUST00000157693 101 ntBASIC2.05□□□□□ -2.08
Col6a4A2AX52 Gm22257-201ENSMUST00000158687 301 ntBASIC2.05□□□□□ -2.08
Col6a4A2AX52 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC2.05□□□□□ -2.08
Col6a4A2AX52 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Col6a4A2AX52 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC2.05□□□□□ -2.08
Col6a4A2AX52 Gm21006-201ENSMUST00000196930 667 ntBASIC2.05□□□□□ -2.08
Col6a4A2AX52 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.05□□□□□ -2.08
Col6a4A2AX52 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC2.05□□□□□ -2.08
Col6a4A2AX52 Gm46389-201ENSMUST00000223199 392 ntBASIC2.05□□□□□ -2.08
Col6a4A2AX52 AC160999.1-201ENSMUST00000225675 810 ntBASIC2.05□□□□□ -2.08
Col6a4A2AX52 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Col6a4A2AX52 Gm23264-201ENSMUST00000083372 107 ntBASIC2.05□□□□□ -2.08
Col6a4A2AX52 Mir693-201ENSMUST00000102187 89 ntBASIC2.05□□□□□ -2.08
Col6a4A2AX52 Gm13439-201ENSMUST00000117541 409 ntBASIC2.05□□□□□ -2.08
Col6a4A2AX52 Gm15025-201ENSMUST00000118434 418 ntBASIC2.05□□□□□ -2.08
Col6a4A2AX52 Gm13588-201ENSMUST00000120026 135 ntBASIC2.05□□□□□ -2.08
Col6a4A2AX52 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.05□□□□□ -2.08
Col6a4A2AX52 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Col6a4A2AX52 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
Col6a4A2AX52 Snord53-201ENSMUST00000175146 78 ntBASIC2.05□□□□□ -2.08
Col6a4A2AX52 Gm3852-201ENSMUST00000182781 264 ntBASIC2.05□□□□□ -2.08
Col6a4A2AX52 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC2.05□□□□□ -2.08
Col6a4A2AX52 Gm19080-201ENSMUST00000196082 550 ntBASIC2.05□□□□□ -2.08
Col6a4A2AX52 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.05□□□□□ -2.08
Col6a4A2AX52 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.04□□□□□ -2.08
Col6a4A2AX52 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col6a4A2AX52 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.04□□□□□ -2.08
Col6a4A2AX52 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC2.04□□□□□ -2.08
Col6a4A2AX52 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col6a4A2AX52 Gm17711-201ENSMUST00000172028 237 ntBASIC2.04□□□□□ -2.08
Col6a4A2AX52 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col6a4A2AX52 Gm21489-201ENSMUST00000189668 818 ntBASIC2.04□□□□□ -2.08
Col6a4A2AX52 Gm28466-201ENSMUST00000190678 659 ntBASIC2.04□□□□□ -2.08
Col6a4A2AX52 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.04□□□□□ -2.08
Col6a4A2AX52 Gm18026-201ENSMUST00000222789 727 ntBASIC2.04□□□□□ -2.08
Col6a4A2AX52 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col6a4A2AX52 Gm23623-201ENSMUST00000082461 107 ntBASIC2.04□□□□□ -2.08
Col6a4A2AX52 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col6a4A2AX52 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
Col6a4A2AX52 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Col6a4A2AX52 Gm25094-201ENSMUST00000103992 131 ntBASIC2.03□□□□□ -2.08
Col6a4A2AX52 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.03□□□□□ -2.08
Col6a4A2AX52 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col6a4A2AX52 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC2.03□□□□□ -2.08
Col6a4A2AX52 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col6a4A2AX52 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col6a4A2AX52 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col6a4A2AX52 Gm9892-201ENSMUST00000182415 992 ntBASIC2.03□□□□□ -2.08
Col6a4A2AX52 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC2.03□□□□□ -2.08
Col6a4A2AX52 Gm43415-201ENSMUST00000201934 750 ntBASIC2.03□□□□□ -2.08
Col6a4A2AX52 Gm36247-201ENSMUST00000211834 285 ntBASIC2.03□□□□□ -2.08
Col6a4A2AX52 Gm18346-201ENSMUST00000216782 325 ntBASIC2.03□□□□□ -2.08
Col6a4A2AX52 Gm5175-202ENSMUST00000219699 529 ntBASIC2.03□□□□□ -2.08
Col6a4A2AX52 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.03□□□□□ -2.08
Col6a4A2AX52 Gm23677-201ENSMUST00000083156 104 ntBASIC2.03□□□□□ -2.08
Col6a4A2AX52 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC2.03□□□□□ -2.08
Col6a4A2AX52 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Col6a4A2AX52 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.03□□□□□ -2.08
Col6a4A2AX52 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.03□□□□□ -2.08
Col6a4A2AX52 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
Col6a4A2AX52 Gm24885-201ENSMUST00000158783 270 ntBASIC2.03□□□□□ -2.08
Col6a4A2AX52 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC2.03□□□□□ -2.08
Col6a4A2AX52 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC2.03□□□□□ -2.08
Col6a4A2AX52 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.03□□□□□ -2.08
Col6a4A2AX52 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col6a4A2AX52 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.03□□□□□ -2.08
Col6a4A2AX52 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.03□□□□□ -2.08
Col6a4A2AX52 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Col6a4A2AX52 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Col6a4A2AX52 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.02□□□□□ -2.09
Col6a4A2AX52 Gm22330-201ENSMUST00000158068 115 ntBASIC2.02□□□□□ -2.09
Col6a4A2AX52 Gm24212-201ENSMUST00000158258 132 ntBASIC2.02□□□□□ -2.09
Col6a4A2AX52 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC2.02□□□□□ -2.09
Col6a4A2AX52 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Col6a4A2AX52 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
Col6a4A2AX52 Gm44521-201ENSMUST00000206469 217 ntBASIC2.02□□□□□ -2.09
Col6a4A2AX52 Gm4528-201ENSMUST00000207905 551 ntBASIC2.02□□□□□ -2.09
Col6a4A2AX52 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Col6a4A2AX52 AC137902.2-201ENSMUST00000227989 576 ntBASIC2.02□□□□□ -2.09
Col6a4A2AX52 Gm22683-201ENSMUST00000082854 137 ntBASIC2.02□□□□□ -2.09
Col6a4A2AX52 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Col6a4A2AX52 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.02□□□□□ -2.09
Col6a4A2AX52 Mir592-201ENSMUST00000102113 96 ntBASIC2.02□□□□□ -2.09
Col6a4A2AX52 Mir344e-201ENSMUST00000104677 66 ntBASIC2.02□□□□□ -2.09
Col6a4A2AX52 Gm15195-201ENSMUST00000118775 263 ntBASIC2.02□□□□□ -2.09
Col6a4A2AX52 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC2.02□□□□□ -2.09
Col6a4A2AX52 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.02□□□□□ -2.09
Col6a4A2AX52 Gm23980-201ENSMUST00000157135 158 ntBASIC2.02□□□□□ -2.09
Col6a4A2AX52 Gm25669-201ENSMUST00000157699 112 ntBASIC2.02□□□□□ -2.09
Col6a4A2AX52 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Col6a4A2AX52 Gm29657-201ENSMUST00000189807 342 ntBASIC2.02□□□□□ -2.09
Col6a4A2AX52 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms