Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm42445-201ENSMUST00000196996 2893 ntBASIC1.51□□□□□ -2.17
Ubr4A2AN08 Gm22472-201ENSMUST00000104115 134 ntBASIC1.51□□□□□ -2.17
Ubr4A2AN08 Gm24213-201ENSMUST00000158255 258 ntBASIC1.51□□□□□ -2.17
Ubr4A2AN08 Gm27326-201ENSMUST00000183504 95 ntBASIC1.51□□□□□ -2.17
Ubr4A2AN08 Gm38018-201ENSMUST00000195651 540 ntBASIC1.51□□□□□ -2.17
Ubr4A2AN08 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC1.51□□□□□ -2.17
Ubr4A2AN08 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.51□□□□□ -2.17
Ubr4A2AN08 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC1.5□□□□□ -2.17
Ubr4A2AN08 Gm21033-201ENSMUST00000208590 2608 ntBASIC1.5□□□□□ -2.17
Ubr4A2AN08 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC1.5□□□□□ -2.17
Ubr4A2AN08 Gm24047-201ENSMUST00000102405 104 ntBASIC1.5□□□□□ -2.17
Ubr4A2AN08 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC1.5□□□□□ -2.17
Ubr4A2AN08 Gm45006-201ENSMUST00000206078 690 ntBASIC1.5□□□□□ -2.17
Ubr4A2AN08 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC1.5□□□□□ -2.17
Ubr4A2AN08 LOC667541-201ENSMUST00000223408 278 ntBASIC1.5□□□□□ -2.17
Ubr4A2AN08 AV026068-237ENSMUST00000226075 572 ntBASIC1.5□□□□□ -2.17
Ubr4A2AN08 Gm27013-202ENSMUST00000205067 1436 ntBASIC1.5□□□□□ -2.17
Ubr4A2AN08 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Ubr4A2AN08 Gm24280-201ENSMUST00000104237 134 ntBASIC1.5□□□□□ -2.17
Ubr4A2AN08 Mir3058-201ENSMUST00000175126 91 ntBASIC1.5□□□□□ -2.17
Ubr4A2AN08 Gm22565-201ENSMUST00000175540 69 ntBASIC1.5□□□□□ -2.17
Ubr4A2AN08 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC1.5□□□□□ -2.17
Ubr4A2AN08 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC1.5□□□□□ -2.17
Ubr4A2AN08 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.5□□□□□ -2.17
Ubr4A2AN08 Gm45048-201ENSMUST00000207058 429 ntBASIC1.5□□□□□ -2.17
Ubr4A2AN08 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.5□□□□□ -2.17
Ubr4A2AN08 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Ubr4A2AN08 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Ubr4A2AN08 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Ubr4A2AN08 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Ubr4A2AN08 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Ubr4A2AN08 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Ubr4A2AN08 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Ubr4A2AN08 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Ubr4A2AN08 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Ubr4A2AN08 Gm42533-201ENSMUST00000196247 157 ntBASIC1.5□□□□□ -2.17
Ubr4A2AN08 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC1.5□□□□□ -2.17
Ubr4A2AN08 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Ubr4A2AN08 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC1.5□□□□□ -2.17
Ubr4A2AN08 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Ubr4A2AN08 Snord93-201ENSMUST00000175580 71 ntBASIC1.5□□□□□ -2.17
Ubr4A2AN08 Gm37676-201ENSMUST00000195496 507 ntBASIC1.5□□□□□ -2.17
Ubr4A2AN08 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC1.5□□□□□ -2.17
Ubr4A2AN08 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC1.5□□□□□ -2.17
Ubr4A2AN08 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC1.5□□□□□ -2.17
Ubr4A2AN08 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Ubr4A2AN08 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Ubr4A2AN08 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
Ubr4A2AN08 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ubr4A2AN08 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ubr4A2AN08 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ubr4A2AN08 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ubr4A2AN08 Gm14125-201ENSMUST00000113442 680 ntBASIC1.49□□□□□ -2.17
Ubr4A2AN08 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC1.49□□□□□ -2.17
Ubr4A2AN08 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC1.49□□□□□ -2.17
Ubr4A2AN08 Gm23677-201ENSMUST00000083156 104 ntBASIC1.49□□□□□ -2.17
Ubr4A2AN08 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.49□□□□□ -2.17
Ubr4A2AN08 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC1.49□□□□□ -2.17
Ubr4A2AN08 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ubr4A2AN08 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC1.49□□□□□ -2.17
Ubr4A2AN08 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
Ubr4A2AN08 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Ubr4A2AN08 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ubr4A2AN08 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
Ubr4A2AN08 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC1.49□□□□□ -2.17
Ubr4A2AN08 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Ubr4A2AN08 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Ubr4A2AN08 Gm7039-201ENSMUST00000205138 346 ntBASIC1.49□□□□□ -2.17
Ubr4A2AN08 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC1.49□□□□□ -2.17
Ubr4A2AN08 Gm16566-201ENSMUST00000160387 910 ntBASIC1.49□□□□□ -2.17
Ubr4A2AN08 Gm18698-201ENSMUST00000192327 668 ntBASIC1.49□□□□□ -2.17
Ubr4A2AN08 Gm44254-201ENSMUST00000204184 322 ntBASIC1.49□□□□□ -2.17
Ubr4A2AN08 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Ubr4A2AN08 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Ubr4A2AN08 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ubr4A2AN08 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC1.49□□□□□ -2.17
Ubr4A2AN08 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ubr4A2AN08 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ubr4A2AN08 Gm45577-201ENSMUST00000210206 2287 ntBASIC1.49□□□□□ -2.17
Ubr4A2AN08 Gm11356-201ENSMUST00000118974 192 ntBASIC1.49□□□□□ -2.17
Ubr4A2AN08 Gm14570-201ENSMUST00000119444 391 ntBASIC1.49□□□□□ -2.17
Ubr4A2AN08 Trbv27-201ENSMUST00000193711 277 ntBASIC1.49□□□□□ -2.17
Ubr4A2AN08 Gm44161-201ENSMUST00000203532 253 ntBASIC1.49□□□□□ -2.17
Ubr4A2AN08 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
Ubr4A2AN08 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Ubr4A2AN08 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.48□□□□□ -2.17
Ubr4A2AN08 Neat1-201ENSMUST00000173672 20771 ntBASIC1.48□□□□□ -2.17
Ubr4A2AN08 Gm45033-201ENSMUST00000206710 3167 ntBASIC1.48□□□□□ -2.17
Ubr4A2AN08 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Ubr4A2AN08 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
Ubr4A2AN08 Mir301b-201ENSMUST00000102333 97 ntBASIC1.48□□□□□ -2.17
Ubr4A2AN08 Gm9078-201ENSMUST00000119126 617 ntBASIC1.48□□□□□ -2.17
Ubr4A2AN08 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC1.48□□□□□ -2.17
Ubr4A2AN08 Gm28637-201ENSMUST00000179424 345 ntBASIC1.48□□□□□ -2.17
Ubr4A2AN08 Gm44682-201ENSMUST00000208501 2614 ntBASIC1.48□□□□□ -2.17
Ubr4A2AN08 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Ubr4A2AN08 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
Ubr4A2AN08 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Ubr4A2AN08 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Ubr4A2AN08 Gm25500-201ENSMUST00000104426 123 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms