Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
Col6a6Q8C6K9 Gm29610-201ENSMUST00000187749 453 ntBASIC2.16□□□□□ -2.06
Col6a6Q8C6K9 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Col6a6Q8C6K9 Gm46389-201ENSMUST00000223199 392 ntBASIC2.16□□□□□ -2.06
Col6a6Q8C6K9 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Col6a6Q8C6K9 BC055308-201ENSMUST00000193380 2538 ntBASIC2.16□□□□□ -2.06
Col6a6Q8C6K9 AC131720.1-201ENSMUST00000218629 2132 ntBASIC2.16□□□□□ -2.06
Col6a6Q8C6K9 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.15□□□□□ -2.06
Col6a6Q8C6K9 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Col6a6Q8C6K9 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Col6a6Q8C6K9 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
Col6a6Q8C6K9 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
Col6a6Q8C6K9 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.15□□□□□ -2.06
Col6a6Q8C6K9 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
Col6a6Q8C6K9 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.15□□□□□ -2.06
Col6a6Q8C6K9 Mrgprb13-201ENSMUST00000188191 985 ntBASIC2.15□□□□□ -2.06
Col6a6Q8C6K9 Gm43083-201ENSMUST00000199594 476 ntBASIC2.15□□□□□ -2.06
Col6a6Q8C6K9 Gm45105-201ENSMUST00000207824 397 ntBASIC2.15□□□□□ -2.06
Col6a6Q8C6K9 AC152946.2-201ENSMUST00000219071 337 ntBASIC2.15□□□□□ -2.06
Col6a6Q8C6K9 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.15□□□□□ -2.06
Col6a6Q8C6K9 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC2.15□□□□□ -2.06
Col6a6Q8C6K9 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Col6a6Q8C6K9 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Col6a6Q8C6K9 Gm45483-201ENSMUST00000209845 1682 ntBASIC2.15□□□□□ -2.07
Col6a6Q8C6K9 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Col6a6Q8C6K9 Gm25421-201ENSMUST00000104218 164 ntBASIC2.15□□□□□ -2.07
Col6a6Q8C6K9 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Col6a6Q8C6K9 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Col6a6Q8C6K9 Gm22257-201ENSMUST00000158687 301 ntBASIC2.15□□□□□ -2.07
Col6a6Q8C6K9 Gm5263-201ENSMUST00000163646 601 ntBASIC2.15□□□□□ -2.07
Col6a6Q8C6K9 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Col6a6Q8C6K9 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Col6a6Q8C6K9 Gm28466-201ENSMUST00000190678 659 ntBASIC2.15□□□□□ -2.07
Col6a6Q8C6K9 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC2.15□□□□□ -2.07
Col6a6Q8C6K9 Gm42526-201ENSMUST00000198956 393 ntBASIC2.15□□□□□ -2.07
Col6a6Q8C6K9 Gm18026-201ENSMUST00000222789 727 ntBASIC2.15□□□□□ -2.07
Col6a6Q8C6K9 AC137902.2-201ENSMUST00000227989 576 ntBASIC2.15□□□□□ -2.07
Col6a6Q8C6K9 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Col6a6Q8C6K9 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Col6a6Q8C6K9 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Col6a6Q8C6K9 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Col6a6Q8C6K9 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm23942-201ENSMUST00000101956 107 ntBASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm23424-201ENSMUST00000103889 110 ntBASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Mir344e-201ENSMUST00000104677 66 ntBASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm19253-201ENSMUST00000204279 307 ntBASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Mir758-201ENSMUST00000103260 81 ntBASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm5396-201ENSMUST00000121222 532 ntBASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Mir669n-201ENSMUST00000158636 54 ntBASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm26993-201ENSMUST00000182766 789 ntBASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm37837-201ENSMUST00000191743 604 ntBASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm2979-201ENSMUST00000193442 463 ntBASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm44408-201ENSMUST00000200205 66 ntBASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm17838-201ENSMUST00000205872 876 ntBASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm5175-202ENSMUST00000219699 529 ntBASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Gm25699-201ENSMUST00000082896 167 ntBASIC2.14□□□□□ -2.07
Col6a6Q8C6K9 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.13□□□□□ -2.07
Col6a6Q8C6K9 Gm23867-201ENSMUST00000122649 274 ntBASIC2.13□□□□□ -2.07
Col6a6Q8C6K9 Gm23043-201ENSMUST00000157890 109 ntBASIC2.13□□□□□ -2.07
Col6a6Q8C6K9 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC2.13□□□□□ -2.07
Col6a6Q8C6K9 Gm45814-201ENSMUST00000212646 775 ntBASIC2.13□□□□□ -2.07
Col6a6Q8C6K9 Gm7588-201ENSMUST00000216866 571 ntBASIC2.13□□□□□ -2.07
Col6a6Q8C6K9 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Col6a6Q8C6K9 Gm6757-201ENSMUST00000189810 1706 ntBASIC2.13□□□□□ -2.07
Col6a6Q8C6K9 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Col6a6Q8C6K9 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC2.13□□□□□ -2.07
Col6a6Q8C6K9 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.13□□□□□ -2.07
Col6a6Q8C6K9 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.13□□□□□ -2.07
Col6a6Q8C6K9 Gm37470-201ENSMUST00000193378 2798 ntBASIC2.13□□□□□ -2.07
Col6a6Q8C6K9 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC2.12□□□□□ -2.07
Col6a6Q8C6K9 Gm11414-201ENSMUST00000121795 263 ntBASIC2.12□□□□□ -2.07
Col6a6Q8C6K9 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.12□□□□□ -2.07
Col6a6Q8C6K9 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms